==1074519== Memcheck, a memory error detector ==1074519== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074519== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074519== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==1074519== Parent PID: 1053583 ==1074519== ==1074519== ==1074519== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074519== Open file descriptor 12: ==1074519== at 0x6BED22D: pipe (pipe.c:29) ==1074519== by 0x1045D07D: ??? ==1074519== by 0xB77F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074519== by 0x5EF4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074519== by 0x5E8DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074519== by 0x4B64D38: PetscInitialize (pinit.c:924) ==1074519== by 0x4A3671D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074519== by 0x4A3676B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074519== by 0x123145: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1074519== by 0x11CC4F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074519== by 0x11FBAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074519== by 0x11FA4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074519== by 0x1200E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074519== by 0x11AF80: main (TestAirwayGenerator.cpp:19) ==1074519== ==1074519== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074519== at 0x6BF1BCC: __open_nocancel (open64_nocancel.c:39) ==1074519== by 0x6B75C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074519== by 0x5DEE822: ??? ==1074519== by 0x5DEE96F: ??? ==1074519== by 0xB8246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074519== by 0xB824938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074519== by 0xB7DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074519== by 0xB77F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074519== by 0x5EF4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074519== by 0x5E8DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074519== by 0x4B64D38: PetscInitialize (pinit.c:924) ==1074519== by 0x4A3671D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074519== by 0x4A3676B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074519== by 0x123145: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1074519== by 0x11CC4F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074519== by 0x11FBAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074519== by 0x11FA4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074519== by 0x1200E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074519== by 0x11AF80: main (TestAirwayGenerator.cpp:19) ==1074519== ==1074519== Open file descriptor 114: ==1074519== ==1074519== ==1074519== Open file descriptor 110: ==1074519== ==1074519== ==1074519== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==1074519== ==1074519== ==1074519== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074519== ==1074519== ==1074519== ==1074519== HEAP SUMMARY: ==1074519== in use at exit: 700,743 bytes in 9,377 blocks ==1074519== total heap usage: 629,275 allocs, 619,898 frees, 1,802,089,434 bytes allocated ==1074519== ==1074519== LEAK SUMMARY: ==1074519== definitely lost: 0 bytes in 0 blocks ==1074519== indirectly lost: 0 bytes in 0 blocks ==1074519== possibly lost: 0 bytes in 0 blocks ==1074519== still reachable: 24 bytes in 2 blocks ==1074519== suppressed: 700,719 bytes in 9,375 blocks ==1074519== Reachable blocks (those to which a pointer was found) are not shown. ==1074519== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074519== ==1074519== For lists of detected and suppressed errors, rerun with: -s ==1074519== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)