==1074686== Memcheck, a memory error detector ==1074686== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074686== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074686== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1074686== Parent PID: 1053583 ==1074686== ==1074686== ==1074686== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074686== Open file descriptor 12: ==1074686== at 0xA63522D: pipe (pipe.c:29) ==1074686== by 0x1401407D: ??? ==1074686== by 0xD6404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074686== by 0x9F25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074686== by 0x9EBED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074686== by 0xA9D0D38: PetscInitialize (pinit.c:924) ==1074686== by 0x9DE771D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074686== by 0x9DE776B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074686== by 0x12DCC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074686== by 0x128B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074686== by 0x12B9DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074686== by 0x12B8D7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074686== by 0x12BEEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074686== by 0x1273A0: main (TestExtendedBidomainProblem.cpp:18) ==1074686== ==1074686== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074686== at 0xA639BCC: __open_nocancel (open64_nocancel.c:39) ==1074686== by 0xA5BDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074686== by 0x9E1F822: ??? ==1074686== by 0x9E1F96F: ??? ==1074686== by 0xD6E56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074686== by 0xD6E5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074686== by 0xD69B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074686== by 0xD6402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074686== by 0x9F25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074686== by 0x9EBED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074686== by 0xA9D0D38: PetscInitialize (pinit.c:924) ==1074686== by 0x9DE771D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074686== by 0x9DE776B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074686== by 0x12DCC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074686== by 0x128B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074686== by 0x12B9DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074686== by 0x12B8D7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074686== by 0x12BEEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074686== by 0x1273A0: main (TestExtendedBidomainProblem.cpp:18) ==1074686== ==1074686== Open file descriptor 114: ==1074686== ==1074686== ==1074686== Open file descriptor 110: ==1074686== ==1074686== ==1074686== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1074686== ==1074686== ==1074686== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074686== ==1074686== ==1074686== ==1074686== HEAP SUMMARY: ==1074686== in use at exit: 701,168 bytes in 9,383 blocks ==1074686== total heap usage: 2,374,894 allocs, 2,365,511 frees, 2,483,329,495 bytes allocated ==1074686== ==1074686== LEAK SUMMARY: ==1074686== definitely lost: 0 bytes in 0 blocks ==1074686== indirectly lost: 0 bytes in 0 blocks ==1074686== possibly lost: 0 bytes in 0 blocks ==1074686== still reachable: 24 bytes in 2 blocks ==1074686== suppressed: 701,144 bytes in 9,381 blocks ==1074686== Reachable blocks (those to which a pointer was found) are not shown. ==1074686== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074686== ==1074686== For lists of detected and suppressed errors, rerun with: -s ==1074686== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)