==1055874== Memcheck, a memory error detector ==1055874== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1055874== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1055874== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==1055874== Parent PID: 1053583 ==1055874== ==1055874== ==1055874== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1055874== Open file descriptor 12: ==1055874== at 0xECD222D: pipe (pipe.c:29) ==1055874== by 0x18AF107D: ??? ==1055874== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1055874== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1055874== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1055874== by 0xF630D38: PetscInitialize (pinit.c:924) ==1055874== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1055874== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1055874== by 0x12DB2C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1055874== by 0x1277FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1055874== by 0x129F16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1055874== by 0x129E12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1055874== by 0x12A425: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1055874== by 0x126000: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==1055874== ==1055874== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1055874== at 0xECD6BCC: __open_nocancel (open64_nocancel.c:39) ==1055874== by 0xEC5AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1055874== by 0xE528822: ??? ==1055874== by 0xE52896F: ??? ==1055874== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1055874== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1055874== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1055874== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1055874== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1055874== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1055874== by 0xF630D38: PetscInitialize (pinit.c:924) ==1055874== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1055874== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1055874== by 0x12DB2C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1055874== by 0x1277FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1055874== by 0x129F16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1055874== by 0x129E12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1055874== by 0x12A425: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1055874== by 0x126000: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==1055874== ==1055874== Open file descriptor 114: ==1055874== ==1055874== ==1055874== Open file descriptor 110: ==1055874== ==1055874== ==1055874== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==1055874== ==1055874== ==1055874== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1055874== ==1055874== ==1055874== ==1055874== HEAP SUMMARY: ==1055874== in use at exit: 700,704 bytes in 9,374 blocks ==1055874== total heap usage: 3,559,354 allocs, 3,549,980 frees, 4,480,929,020 bytes allocated ==1055874== ==1055874== LEAK SUMMARY: ==1055874== definitely lost: 0 bytes in 0 blocks ==1055874== indirectly lost: 0 bytes in 0 blocks ==1055874== possibly lost: 0 bytes in 0 blocks ==1055874== still reachable: 56 bytes in 3 blocks ==1055874== suppressed: 700,648 bytes in 9,371 blocks ==1055874== Reachable blocks (those to which a pointer was found) are not shown. ==1055874== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1055874== ==1055874== For lists of detected and suppressed errors, rerun with: -s ==1055874== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)