==1056367== Memcheck, a memory error detector ==1056367== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1056367== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1056367== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1056367== Parent PID: 1053583 ==1056367== ==1056367== ==1056367== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1056367== Open file descriptor 12: ==1056367== at 0xF19222D: pipe (pipe.c:29) ==1056367== by 0x18AF007D: ??? ==1056367== by 0x142194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1056367== by 0x10E1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1056367== by 0x10DB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1056367== by 0xFAACD38: PetscInitialize (pinit.c:924) ==1056367== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1056367== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1056367== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1056367== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1056367== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1056367== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1056367== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1056367== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1056367== ==1056367== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1056367== at 0xF196BCC: __open_nocancel (open64_nocancel.c:39) ==1056367== by 0xF11AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1056367== by 0xE528822: ??? ==1056367== by 0xE52896F: ??? ==1056367== by 0x142BE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1056367== by 0x142BE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1056367== by 0x14274922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1056367== by 0x142192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1056367== by 0x10E1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1056367== by 0x10DB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1056367== by 0xFAACD38: PetscInitialize (pinit.c:924) ==1056367== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1056367== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1056367== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1056367== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1056367== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1056367== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1056367== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1056367== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1056367== ==1056367== Open file descriptor 114: ==1056367== ==1056367== ==1056367== Open file descriptor 110: ==1056367== ==1056367== ==1056367== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1056367== ==1056367== ==1056367== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1056367== ==1056367== ==1056367== ==1056367== HEAP SUMMARY: ==1056367== in use at exit: 700,704 bytes in 9,374 blocks ==1056367== total heap usage: 6,927,114 allocs, 6,917,740 frees, 8,040,070,252 bytes allocated ==1056367== ==1056367== LEAK SUMMARY: ==1056367== definitely lost: 0 bytes in 0 blocks ==1056367== indirectly lost: 0 bytes in 0 blocks ==1056367== possibly lost: 0 bytes in 0 blocks ==1056367== still reachable: 56 bytes in 3 blocks ==1056367== suppressed: 700,648 bytes in 9,371 blocks ==1056367== Reachable blocks (those to which a pointer was found) are not shown. ==1056367== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1056367== ==1056367== For lists of detected and suppressed errors, rerun with: -s ==1056367== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)