==1059658== Memcheck, a memory error detector ==1059658== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1059658== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1059658== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1059658== Parent PID: 1053583 ==1059658== ==1059658== ==1059658== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1059658== Open file descriptor 12: ==1059658== at 0xED1622D: pipe (pipe.c:29) ==1059658== by 0x18AF107D: ??? ==1059658== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059658== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059658== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059658== by 0xF630D38: PetscInitialize (pinit.c:924) ==1059658== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059658== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059658== by 0x1E1234: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059658== by 0x1D7453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059658== by 0x1DAE3E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059658== by 0x1DACDE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059658== by 0x1DB375: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059658== by 0x1D5740: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1059658== ==1059658== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1059658== at 0xED1ABCC: __open_nocancel (open64_nocancel.c:39) ==1059658== by 0xEC9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1059658== by 0xE528822: ??? ==1059658== by 0xE52896F: ??? ==1059658== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059658== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059658== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059658== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059658== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059658== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059658== by 0xF630D38: PetscInitialize (pinit.c:924) ==1059658== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059658== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059658== by 0x1E1234: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059658== by 0x1D7453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059658== by 0x1DAE3E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059658== by 0x1DACDE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059658== by 0x1DB375: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059658== by 0x1D5740: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1059658== ==1059658== Open file descriptor 114: ==1059658== ==1059658== ==1059658== Open file descriptor 110: ==1059658== ==1059658== ==1059658== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1059658== ==1059658== ==1059658== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1059658== ==1059658== ==1059658== ==1059658== HEAP SUMMARY: ==1059658== in use at exit: 700,720 bytes in 9,375 blocks ==1059658== total heap usage: 11,679,391 allocs, 11,670,016 frees, 2,221,813,315 bytes allocated ==1059658== ==1059658== LEAK SUMMARY: ==1059658== definitely lost: 0 bytes in 0 blocks ==1059658== indirectly lost: 0 bytes in 0 blocks ==1059658== possibly lost: 0 bytes in 0 blocks ==1059658== still reachable: 72 bytes in 4 blocks ==1059658== suppressed: 700,648 bytes in 9,371 blocks ==1059658== Reachable blocks (those to which a pointer was found) are not shown. ==1059658== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1059658== ==1059658== For lists of detected and suppressed errors, rerun with: -s ==1059658== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)