==1116373== Memcheck, a memory error detector ==1116373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1116373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1116373== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1116373== Parent PID: 1114737 ==1116373== ==1116373== ==1116373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1116373== Open file descriptor 12: ==1116373== at 0xEBFB22D: pipe (pipe.c:29) ==1116373== by 0x18A6F07D: ??? ==1116373== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1116373== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1116373== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1116373== by 0xF4E6D38: PetscInitialize (pinit.c:924) ==1116373== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1116373== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1116373== by 0x165946: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1116373== by 0x15DD39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1116373== by 0x160F08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1116373== by 0x160DA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1116373== by 0x16143F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1116373== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==1116373== ==1116373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1116373== at 0xEBFFBCC: __open_nocancel (open64_nocancel.c:39) ==1116373== by 0xEB83C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1116373== by 0xE4F6822: ??? ==1116373== by 0xE4F696F: ??? ==1116373== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1116373== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1116373== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1116373== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1116373== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1116373== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1116373== by 0xF4E6D38: PetscInitialize (pinit.c:924) ==1116373== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1116373== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1116373== by 0x165946: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1116373== by 0x15DD39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1116373== by 0x160F08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1116373== by 0x160DA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1116373== by 0x16143F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1116373== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==1116373== ==1116373== Open file descriptor 114: ==1116373== ==1116373== ==1116373== Open file descriptor 110: ==1116373== ==1116373== ==1116373== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==1116373== ==1116373== ==1116373== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1116373== ==1116373== ==1116373== ==1116373== HEAP SUMMARY: ==1116373== in use at exit: 700,759 bytes in 9,378 blocks ==1116373== total heap usage: 77,612 allocs, 68,234 frees, 1,362,420,334 bytes allocated ==1116373== ==1116373== LEAK SUMMARY: ==1116373== definitely lost: 0 bytes in 0 blocks ==1116373== indirectly lost: 0 bytes in 0 blocks ==1116373== possibly lost: 0 bytes in 0 blocks ==1116373== still reachable: 56 bytes in 3 blocks ==1116373== suppressed: 700,703 bytes in 9,375 blocks ==1116373== Reachable blocks (those to which a pointer was found) are not shown. ==1116373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1116373== ==1116373== For lists of detected and suppressed errors, rerun with: -s ==1116373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)