==1115935== Memcheck, a memory error detector ==1115935== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1115935== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1115935== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==1115935== Parent PID: 1114737 ==1115935== ==1115935== ==1115935== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1115935== Open file descriptor 12: ==1115935== at 0xE4B322D: pipe (pipe.c:29) ==1115935== by 0x18A6E07D: ??? ==1115935== by 0x12FBF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1115935== by 0xE104418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1115935== by 0xE09DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1115935== by 0xCD94D38: PetscInitialize (pinit.c:924) ==1115935== by 0xCC0720F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1115935== by 0xCC0725D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1115935== by 0x12CFB9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1115935== by 0x127F59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1115935== by 0x12A8E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1115935== by 0x12A782: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1115935== by 0x12AE19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1115935== by 0x126245: main (TestCellMutationStates.cpp:19) ==1115935== ==1115935== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1115935== at 0xE4B7BCC: __open_nocancel (open64_nocancel.c:39) ==1115935== by 0xE43BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1115935== by 0xCC3C822: ??? ==1115935== by 0xCC3C96F: ??? ==1115935== by 0x130646DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1115935== by 0x13064938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1115935== by 0x1301A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1115935== by 0x12FBF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1115935== by 0xE104418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1115935== by 0xE09DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1115935== by 0xCD94D38: PetscInitialize (pinit.c:924) ==1115935== by 0xCC0720F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1115935== by 0xCC0725D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1115935== by 0x12CFB9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1115935== by 0x127F59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1115935== by 0x12A8E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1115935== by 0x12A782: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1115935== by 0x12AE19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1115935== by 0x126245: main (TestCellMutationStates.cpp:19) ==1115935== ==1115935== Open file descriptor 114: ==1115935== ==1115935== ==1115935== Open file descriptor 110: ==1115935== ==1115935== ==1115935== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==1115935== ==1115935== ==1115935== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1115935== ==1115935== ==1115935== ==1115935== HEAP SUMMARY: ==1115935== in use at exit: 700,759 bytes in 9,378 blocks ==1115935== total heap usage: 54,941 allocs, 45,563 frees, 1,353,962,100 bytes allocated ==1115935== ==1115935== LEAK SUMMARY: ==1115935== definitely lost: 0 bytes in 0 blocks ==1115935== indirectly lost: 0 bytes in 0 blocks ==1115935== possibly lost: 0 bytes in 0 blocks ==1115935== still reachable: 56 bytes in 3 blocks ==1115935== suppressed: 700,703 bytes in 9,375 blocks ==1115935== Reachable blocks (those to which a pointer was found) are not shown. ==1115935== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1115935== ==1115935== For lists of detected and suppressed errors, rerun with: -s ==1115935== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)