==1135846== Memcheck, a memory error detector ==1135846== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1135846== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1135846== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1135846== Parent PID: 1114737 ==1135846== ==1135846== ==1135846== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1135846== Open file descriptor 12: ==1135846== at 0xA5E622D: pipe (pipe.c:29) ==1135846== by 0x13F8307D: ??? ==1135846== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1135846== by 0x9ED6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135846== by 0x9E6FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135846== by 0xA970D38: PetscInitialize (pinit.c:924) ==1135846== by 0x9D9B20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1135846== by 0x9D9B25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1135846== by 0x1248E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1135846== by 0x11F993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1135846== by 0x1225FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1135846== by 0x1224F7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1135846== by 0x122B0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1135846== by 0x11E195: main (TestExtendedBidomainProblem.cpp:18) ==1135846== ==1135846== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1135846== at 0xA5EABCC: __open_nocancel (open64_nocancel.c:39) ==1135846== by 0xA56EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1135846== by 0x9DD0822: ??? ==1135846== by 0x9DD096F: ??? ==1135846== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135846== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135846== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135846== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1135846== by 0x9ED6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135846== by 0x9E6FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135846== by 0xA970D38: PetscInitialize (pinit.c:924) ==1135846== by 0x9D9B20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1135846== by 0x9D9B25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1135846== by 0x1248E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1135846== by 0x11F993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1135846== by 0x1225FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1135846== by 0x1224F7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1135846== by 0x122B0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1135846== by 0x11E195: main (TestExtendedBidomainProblem.cpp:18) ==1135846== ==1135846== Open file descriptor 114: ==1135846== ==1135846== ==1135846== Open file descriptor 110: ==1135846== ==1135846== ==1135846== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1135846== ==1135846== ==1135846== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1135846== ==1135846== ==1135846== ==1135846== HEAP SUMMARY: ==1135846== in use at exit: 701,152 bytes in 9,383 blocks ==1135846== total heap usage: 2,375,418 allocs, 2,366,035 frees, 2,483,505,662 bytes allocated ==1135846== ==1135846== LEAK SUMMARY: ==1135846== definitely lost: 0 bytes in 0 blocks ==1135846== indirectly lost: 0 bytes in 0 blocks ==1135846== possibly lost: 0 bytes in 0 blocks ==1135846== still reachable: 24 bytes in 2 blocks ==1135846== suppressed: 701,128 bytes in 9,381 blocks ==1135846== Reachable blocks (those to which a pointer was found) are not shown. ==1135846== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1135846== ==1135846== For lists of detected and suppressed errors, rerun with: -s ==1135846== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)