==1137609== Memcheck, a memory error detector ==1137609== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1137609== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1137609== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1137609== Parent PID: 1114737 ==1137609== ==1137609== ==1137609== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1137609== Open file descriptor 12: ==1137609== at 0xA50622D: pipe (pipe.c:29) ==1137609== by 0x13F8307D: ??? ==1137609== by 0xF7874CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1137609== by 0xBBFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1137609== by 0xBB97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1137609== by 0xA88ED38: PetscInitialize (pinit.c:924) ==1137609== by 0x9DF220F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1137609== by 0x9DF225D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1137609== by 0x124686: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1137609== by 0x11DC05: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1137609== by 0x12065C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1137609== by 0x1204FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1137609== by 0x120B93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1137609== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1137609== ==1137609== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1137609== at 0xA50ABCC: __open_nocancel (open64_nocancel.c:39) ==1137609== by 0xA48EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1137609== by 0x9E27822: ??? ==1137609== by 0x9E2796F: ??? ==1137609== by 0xF82C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1137609== by 0xF82C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1137609== by 0xF7E2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1137609== by 0xF7872DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1137609== by 0xBBFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1137609== by 0xBB97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1137609== by 0xA88ED38: PetscInitialize (pinit.c:924) ==1137609== by 0x9DF220F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1137609== by 0x9DF225D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1137609== by 0x124686: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1137609== by 0x11DC05: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1137609== by 0x12065C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1137609== by 0x1204FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1137609== by 0x120B93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1137609== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1137609== ==1137609== Open file descriptor 114: ==1137609== ==1137609== ==1137609== Open file descriptor 110: ==1137609== ==1137609== ==1137609== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1137609== ==1137609== ==1137609== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1137609== ==1137609== ==1137609== ==1137609== HEAP SUMMARY: ==1137609== in use at exit: 700,743 bytes in 9,377 blocks ==1137609== total heap usage: 125,162 allocs, 115,785 frees, 1,382,160,449 bytes allocated ==1137609== ==1137609== LEAK SUMMARY: ==1137609== definitely lost: 0 bytes in 0 blocks ==1137609== indirectly lost: 0 bytes in 0 blocks ==1137609== possibly lost: 0 bytes in 0 blocks ==1137609== still reachable: 24 bytes in 2 blocks ==1137609== suppressed: 700,719 bytes in 9,375 blocks ==1137609== Reachable blocks (those to which a pointer was found) are not shown. ==1137609== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1137609== ==1137609== For lists of detected and suppressed errors, rerun with: -s ==1137609== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)