==1117550== Memcheck, a memory error detector ==1117550== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1117550== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1117550== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1117550== Parent PID: 1114737 ==1117550== ==1117550== ==1117550== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1117550== Open file descriptor 12: ==1117550== at 0xF16022D: pipe (pipe.c:29) ==1117550== by 0x18A6F07D: ??? ==1117550== by 0x141964CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1117550== by 0x10DBB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1117550== by 0x10D54D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1117550== by 0xFA4BD38: PetscInitialize (pinit.c:924) ==1117550== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1117550== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1117550== by 0x1D25F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1117550== by 0x1CBF89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1117550== by 0x1CF724: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1117550== by 0x1CF5C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1117550== by 0x1CFC5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1117550== by 0x1CA275: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1117550== ==1117550== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1117550== at 0xF164BCC: __open_nocancel (open64_nocancel.c:39) ==1117550== by 0xF0E8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1117550== by 0xE4F6822: ??? ==1117550== by 0xE4F696F: ??? ==1117550== by 0x1423B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1117550== by 0x1423B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1117550== by 0x141F1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1117550== by 0x141962DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1117550== by 0x10DBB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1117550== by 0x10D54D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1117550== by 0xFA4BD38: PetscInitialize (pinit.c:924) ==1117550== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1117550== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1117550== by 0x1D25F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1117550== by 0x1CBF89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1117550== by 0x1CF724: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1117550== by 0x1CF5C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1117550== by 0x1CFC5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1117550== by 0x1CA275: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1117550== ==1117550== Open file descriptor 114: ==1117550== ==1117550== ==1117550== Open file descriptor 110: ==1117550== ==1117550== ==1117550== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1117550== ==1117550== ==1117550== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1117550== ==1117550== ==1117550== ==1117550== HEAP SUMMARY: ==1117550== in use at exit: 700,688 bytes in 9,374 blocks ==1117550== total heap usage: 7,115,448 allocs, 7,106,074 frees, 8,109,944,839 bytes allocated ==1117550== ==1117550== LEAK SUMMARY: ==1117550== definitely lost: 0 bytes in 0 blocks ==1117550== indirectly lost: 0 bytes in 0 blocks ==1117550== possibly lost: 0 bytes in 0 blocks ==1117550== still reachable: 56 bytes in 3 blocks ==1117550== suppressed: 700,632 bytes in 9,371 blocks ==1117550== Reachable blocks (those to which a pointer was found) are not shown. ==1117550== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1117550== ==1117550== For lists of detected and suppressed errors, rerun with: -s ==1117550== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)