==1120744== Memcheck, a memory error detector ==1120744== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1120744== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1120744== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1120744== Parent PID: 1114737 ==1120744== ==1120744== ==1120744== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1120744== Open file descriptor 12: ==1120744== at 0xECE422D: pipe (pipe.c:29) ==1120744== by 0x18A6F07D: ??? ==1120744== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1120744== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1120744== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1120744== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==1120744== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1120744== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1120744== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1120744== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1120744== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1120744== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1120744== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1120744== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1120744== ==1120744== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1120744== at 0xECE8BCC: __open_nocancel (open64_nocancel.c:39) ==1120744== by 0xEC6CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1120744== by 0xE4F6822: ??? ==1120744== by 0xE4F696F: ??? ==1120744== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1120744== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1120744== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1120744== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1120744== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1120744== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1120744== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==1120744== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1120744== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1120744== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1120744== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1120744== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1120744== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1120744== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1120744== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1120744== ==1120744== Open file descriptor 114: ==1120744== ==1120744== ==1120744== Open file descriptor 110: ==1120744== ==1120744== ==1120744== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1120744== ==1120744== ==1120744== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1120744== ==1120744== ==1120744== ==1120744== HEAP SUMMARY: ==1120744== in use at exit: 700,704 bytes in 9,375 blocks ==1120744== total heap usage: 11,684,060 allocs, 11,674,685 frees, 2,223,720,254 bytes allocated ==1120744== ==1120744== LEAK SUMMARY: ==1120744== definitely lost: 0 bytes in 0 blocks ==1120744== indirectly lost: 0 bytes in 0 blocks ==1120744== possibly lost: 0 bytes in 0 blocks ==1120744== still reachable: 72 bytes in 4 blocks ==1120744== suppressed: 700,632 bytes in 9,371 blocks ==1120744== Reachable blocks (those to which a pointer was found) are not shown. ==1120744== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1120744== ==1120744== For lists of detected and suppressed errors, rerun with: -s ==1120744== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)