==1135417== Memcheck, a memory error detector ==1135417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1135417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1135417== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==1135417== Parent PID: 1114737 ==1135417== ==1135417== ==1135417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1135417== Open file descriptor 12: ==1135417== at 0x1193022D: pipe (pipe.c:29) ==1135417== by 0x1A73007D: ??? ==1135417== by 0x158944CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1135417== by 0x1123A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135417== by 0x111D3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135417== by 0xFEAAD38: PetscInitialize (pinit.c:924) ==1135417== by 0xFD8120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1135417== by 0xFD8125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1135417== by 0x123E71: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1135417== by 0x11F753: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1135417== by 0x1219BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1135417== by 0x1218B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1135417== by 0x121ECB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1135417== by 0x11DF55: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==1135417== ==1135417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1135417== at 0x11934BCC: __open_nocancel (open64_nocancel.c:39) ==1135417== by 0x118B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1135417== by 0x11134822: ??? ==1135417== by 0x1113496F: ??? ==1135417== by 0x159396DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135417== by 0x15939938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135417== by 0x158EF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1135417== by 0x158942DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1135417== by 0x1123A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135417== by 0x111D3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1135417== by 0xFEAAD38: PetscInitialize (pinit.c:924) ==1135417== by 0xFD8120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1135417== by 0xFD8125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1135417== by 0x123E71: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1135417== by 0x11F753: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1135417== by 0x1219BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1135417== by 0x1218B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1135417== by 0x121ECB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1135417== by 0x11DF55: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==1135417== ==1135417== Open file descriptor 114: ==1135417== ==1135417== ==1135417== Open file descriptor 110: ==1135417== ==1135417== ==1135417== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==1135417== ==1135417== ==1135417== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1135417== ==1135417== ==1135417== ==1135417== HEAP SUMMARY: ==1135417== in use at exit: 700,704 bytes in 9,374 blocks ==1135417== total heap usage: 16,188,020 allocs, 16,178,646 frees, 2,845,015,823 bytes allocated ==1135417== ==1135417== LEAK SUMMARY: ==1135417== definitely lost: 0 bytes in 0 blocks ==1135417== indirectly lost: 0 bytes in 0 blocks ==1135417== possibly lost: 0 bytes in 0 blocks ==1135417== still reachable: 56 bytes in 3 blocks ==1135417== suppressed: 700,648 bytes in 9,371 blocks ==1135417== Reachable blocks (those to which a pointer was found) are not shown. ==1135417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1135417== ==1135417== For lists of detected and suppressed errors, rerun with: -s ==1135417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)