==1134879== Memcheck, a memory error detector ==1134879== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1134879== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1134879== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==1134879== Parent PID: 1114737 ==1134879== ==1134879== ==1134879== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1134879== Open file descriptor 12: ==1134879== at 0x100BA22D: pipe (pipe.c:29) ==1134879== by 0x1A73107D: ??? ==1134879== by 0x1487F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1134879== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1134879== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1134879== by 0xE654D38: PetscInitialize (pinit.c:924) ==1134879== by 0xE4C920F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1134879== by 0xE4C925D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1134879== by 0x18BBA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1134879== by 0x1841AF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1134879== by 0x1874BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1134879== by 0x1873B9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1134879== by 0x1879CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1134879== by 0x181DB5: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1134879== ==1134879== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1134879== at 0x100BEBCC: __open_nocancel (open64_nocancel.c:39) ==1134879== by 0x10042C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1134879== by 0xE4FE822: ??? ==1134879== by 0xE4FE96F: ??? ==1134879== by 0x149246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1134879== by 0x14924938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1134879== by 0x148DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1134879== by 0x1487F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1134879== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1134879== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1134879== by 0xE654D38: PetscInitialize (pinit.c:924) ==1134879== by 0xE4C920F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1134879== by 0xE4C925D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1134879== by 0x18BBA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1134879== by 0x1841AF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1134879== by 0x1874BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1134879== by 0x1873B9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1134879== by 0x1879CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1134879== by 0x181DB5: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1134879== ==1134879== Open file descriptor 114: ==1134879== ==1134879== ==1134879== Open file descriptor 110: ==1134879== ==1134879== ==1134879== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==1134879== ==1134879== ==1134879== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1134879== ==1134879== ==1134879== ==1134879== HEAP SUMMARY: ==1134879== in use at exit: 700,919 bytes in 9,380 blocks ==1134879== total heap usage: 264,867 allocs, 255,487 frees, 1,372,333,114 bytes allocated ==1134879== ==1134879== LEAK SUMMARY: ==1134879== definitely lost: 0 bytes in 0 blocks ==1134879== indirectly lost: 0 bytes in 0 blocks ==1134879== possibly lost: 0 bytes in 0 blocks ==1134879== still reachable: 200 bytes in 5 blocks ==1134879== suppressed: 700,719 bytes in 9,375 blocks ==1134879== Reachable blocks (those to which a pointer was found) are not shown. ==1134879== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1134879== ==1134879== For lists of detected and suppressed errors, rerun with: -s ==1134879== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)