==1186743== Memcheck, a memory error detector ==1186743== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1186743== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1186743== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==1186743== Parent PID: 1185596 ==1186743== ==1186743== ==1186743== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1186743== Open file descriptor 12: ==1186743== at 0xE49F22D: pipe (pipe.c:29) ==1186743== by 0x18AFB07D: ??? ==1186743== by 0x1304A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1186743== by 0xE0F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1186743== by 0xE089D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1186743== by 0xCD60D38: PetscInitialize (pinit.c:924) ==1186743== by 0xCC3271D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1186743== by 0xCC3276B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1186743== by 0x133B9D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1186743== by 0x12D1CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1186743== by 0x130218: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1186743== by 0x1300B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1186743== by 0x13074F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1186743== by 0x12B500: main (TestCell.cpp:19) ==1186743== ==1186743== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1186743== at 0xE4A3BCC: __open_nocancel (open64_nocancel.c:39) ==1186743== by 0xE427C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1186743== by 0xDFEA822: ??? ==1186743== by 0xDFEA96F: ??? ==1186743== by 0x130EF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1186743== by 0x130EF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1186743== by 0x130A5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1186743== by 0x1304A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1186743== by 0xE0F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1186743== by 0xE089D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1186743== by 0xCD60D38: PetscInitialize (pinit.c:924) ==1186743== by 0xCC3271D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1186743== by 0xCC3276B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1186743== by 0x133B9D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1186743== by 0x12D1CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1186743== by 0x130218: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1186743== by 0x1300B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1186743== by 0x13074F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1186743== by 0x12B500: main (TestCell.cpp:19) ==1186743== ==1186743== Open file descriptor 114: ==1186743== ==1186743== ==1186743== Open file descriptor 110: ==1186743== ==1186743== ==1186743== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==1186743== ==1186743== ==1186743== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1186743== ==1186743== ==1186743== ==1186743== HEAP SUMMARY: ==1186743== in use at exit: 700,832 bytes in 9,375 blocks ==1186743== total heap usage: 5,185,284 allocs, 5,175,909 frees, 1,834,131,186 bytes allocated ==1186743== ==1186743== LEAK SUMMARY: ==1186743== definitely lost: 0 bytes in 0 blocks ==1186743== indirectly lost: 0 bytes in 0 blocks ==1186743== possibly lost: 0 bytes in 0 blocks ==1186743== still reachable: 184 bytes in 4 blocks ==1186743== suppressed: 700,648 bytes in 9,371 blocks ==1186743== Reachable blocks (those to which a pointer was found) are not shown. ==1186743== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1186743== ==1186743== For lists of detected and suppressed errors, rerun with: -s ==1186743== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)