==1205894== Memcheck, a memory error detector ==1205894== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1205894== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1205894== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==1205894== Parent PID: 1185596 ==1205894== ==1205894== ==1205894== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1205894== Open file descriptor 12: ==1205894== at 0x119BF22D: pipe (pipe.c:29) ==1205894== by 0x1A7CE07D: ??? ==1205894== by 0x159344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1205894== by 0x112C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205894== by 0x11262D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205894== by 0xFF59D38: PetscInitialize (pinit.c:924) ==1205894== by 0xFDCB71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1205894== by 0xFDCB76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1205894== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1205894== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1205894== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1205894== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1205894== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1205894== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1205894== ==1205894== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1205894== at 0x119C3BCC: __open_nocancel (open64_nocancel.c:39) ==1205894== by 0x11947C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1205894== by 0xFE03822: ??? ==1205894== by 0xFE0396F: ??? ==1205894== by 0x159D96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205894== by 0x159D9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205894== by 0x1598F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205894== by 0x159342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1205894== by 0x112C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205894== by 0x11262D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205894== by 0xFF59D38: PetscInitialize (pinit.c:924) ==1205894== by 0xFDCB71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1205894== by 0xFDCB76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1205894== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1205894== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1205894== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1205894== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1205894== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1205894== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1205894== ==1205894== Open file descriptor 114: ==1205894== ==1205894== ==1205894== Open file descriptor 110: ==1205894== ==1205894== ==1205894== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==1205894== ==1205894== ==1205894== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1205894== ==1205894== ==1205894== ==1205894== HEAP SUMMARY: ==1205894== in use at exit: 700,720 bytes in 9,374 blocks ==1205894== total heap usage: 4,061,233 allocs, 4,051,859 frees, 1,967,885,586 bytes allocated ==1205894== ==1205894== LEAK SUMMARY: ==1205894== definitely lost: 0 bytes in 0 blocks ==1205894== indirectly lost: 0 bytes in 0 blocks ==1205894== possibly lost: 0 bytes in 0 blocks ==1205894== still reachable: 56 bytes in 3 blocks ==1205894== suppressed: 700,664 bytes in 9,371 blocks ==1205894== Reachable blocks (those to which a pointer was found) are not shown. ==1205894== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1205894== ==1205894== For lists of detected and suppressed errors, rerun with: -s ==1205894== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)