==1205907== Memcheck, a memory error detector ==1205907== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1205907== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1205907== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1205907== Parent PID: 1185596 ==1205907== ==1205907== ==1205907== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1205907== Open file descriptor 12: ==1205907== at 0x105F122D: pipe (pipe.c:29) ==1205907== by 0x1A7CE07D: ??? ==1205907== by 0x159D24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1205907== by 0x1227B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205907== by 0x12214D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205907== by 0x10F0BD38: PetscInitialize (pinit.c:924) ==1205907== by 0xFDCB71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1205907== by 0xFDCB76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1205907== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1205907== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1205907== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1205907== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1205907== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1205907== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1205907== ==1205907== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1205907== at 0x105F5BCC: __open_nocancel (open64_nocancel.c:39) ==1205907== by 0x10579C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1205907== by 0xFE03822: ??? ==1205907== by 0xFE0396F: ??? ==1205907== by 0x15A776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205907== by 0x15A77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205907== by 0x15A2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1205907== by 0x159D22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1205907== by 0x1227B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205907== by 0x12214D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1205907== by 0x10F0BD38: PetscInitialize (pinit.c:924) ==1205907== by 0xFDCB71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1205907== by 0xFDCB76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1205907== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1205907== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1205907== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1205907== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1205907== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1205907== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1205907== ==1205907== Open file descriptor 114: ==1205907== ==1205907== ==1205907== Open file descriptor 110: ==1205907== ==1205907== ==1205907== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1205907== ==1205907== ==1205907== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1205907== ==1205907== ==1205907== ==1205907== HEAP SUMMARY: ==1205907== in use at exit: 700,720 bytes in 9,374 blocks ==1205907== total heap usage: 6,298,905 allocs, 6,289,531 frees, 2,068,210,696 bytes allocated ==1205907== ==1205907== LEAK SUMMARY: ==1205907== definitely lost: 0 bytes in 0 blocks ==1205907== indirectly lost: 0 bytes in 0 blocks ==1205907== possibly lost: 0 bytes in 0 blocks ==1205907== still reachable: 56 bytes in 3 blocks ==1205907== suppressed: 700,664 bytes in 9,371 blocks ==1205907== Reachable blocks (those to which a pointer was found) are not shown. ==1205907== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1205907== ==1205907== For lists of detected and suppressed errors, rerun with: -s ==1205907== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)