==1187593== Memcheck, a memory error detector ==1187593== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1187593== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1187593== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1187593== Parent PID: 1185596 ==1187593== ==1187593== ==1187593== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1187593== Open file descriptor 12: ==1187593== at 0xED2022D: pipe (pipe.c:29) ==1187593== by 0x18AFA07D: ??? ==1187593== by 0x1410A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187593== by 0x109AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187593== by 0x10943D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187593== by 0xF63AD38: PetscInitialize (pinit.c:924) ==1187593== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187593== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187593== by 0x31B1A6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187593== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187593== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187593== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187593== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187593== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==1187593== ==1187593== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1187593== at 0xED24BCC: __open_nocancel (open64_nocancel.c:39) ==1187593== by 0xECA8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1187593== by 0xE532822: ??? ==1187593== by 0xE53296F: ??? ==1187593== by 0x141AF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187593== by 0x141AF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187593== by 0x14165922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187593== by 0x1410A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187593== by 0x109AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187593== by 0x10943D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187593== by 0xF63AD38: PetscInitialize (pinit.c:924) ==1187593== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187593== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187593== by 0x31B1A6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187593== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187593== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187593== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187593== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187593== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==1187593== ==1187593== Open file descriptor 114: ==1187593== ==1187593== ==1187593== Open file descriptor 110: ==1187593== ==1187593== ==1187593== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1187593== ==1187593== ==1187593== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1187593== ==1187593== ==1187593== ==1187593== HEAP SUMMARY: ==1187593== in use at exit: 700,704 bytes in 9,374 blocks ==1187593== total heap usage: 12,820,720 allocs, 12,811,346 frees, 3,863,491,589 bytes allocated ==1187593== ==1187593== LEAK SUMMARY: ==1187593== definitely lost: 0 bytes in 0 blocks ==1187593== indirectly lost: 0 bytes in 0 blocks ==1187593== possibly lost: 0 bytes in 0 blocks ==1187593== still reachable: 56 bytes in 3 blocks ==1187593== suppressed: 700,648 bytes in 9,371 blocks ==1187593== Reachable blocks (those to which a pointer was found) are not shown. ==1187593== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1187593== ==1187593== For lists of detected and suppressed errors, rerun with: -s ==1187593== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)