==1187113== Memcheck, a memory error detector ==1187113== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1187113== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1187113== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==1187113== Parent PID: 1185596 ==1187113== ==1187113== ==1187113== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1187113== Open file descriptor 12: ==1187113== at 0xE8B022D: pipe (pipe.c:29) ==1187113== by 0x18AFA07D: ??? ==1187113== by 0x140BD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187113== by 0x1057E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187113== by 0x10517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187113== by 0xF20CD38: PetscInitialize (pinit.c:924) ==1187113== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187113== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187113== by 0x11A6CC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187113== by 0x115B85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187113== by 0x118638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187113== by 0x1184D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187113== by 0x118B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187113== by 0x113EB5: main (TestPottsElement.cpp:19) ==1187113== ==1187113== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1187113== at 0xE8B4BCC: __open_nocancel (open64_nocancel.c:39) ==1187113== by 0xE838C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1187113== by 0xE532822: ??? ==1187113== by 0xE53296F: ??? ==1187113== by 0x141626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187113== by 0x14162938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187113== by 0x14118922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187113== by 0x140BD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187113== by 0x1057E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187113== by 0x10517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187113== by 0xF20CD38: PetscInitialize (pinit.c:924) ==1187113== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187113== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187113== by 0x11A6CC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187113== by 0x115B85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187113== by 0x118638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187113== by 0x1184D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187113== by 0x118B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187113== by 0x113EB5: main (TestPottsElement.cpp:19) ==1187113== ==1187113== Open file descriptor 114: ==1187113== ==1187113== ==1187113== Open file descriptor 110: ==1187113== ==1187113== ==1187113== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==1187113== ==1187113== ==1187113== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1187113== ==1187113== ==1187113== ==1187113== HEAP SUMMARY: ==1187113== in use at exit: 700,743 bytes in 9,377 blocks ==1187113== total heap usage: 54,904 allocs, 45,527 frees, 1,353,929,402 bytes allocated ==1187113== ==1187113== LEAK SUMMARY: ==1187113== definitely lost: 0 bytes in 0 blocks ==1187113== indirectly lost: 0 bytes in 0 blocks ==1187113== possibly lost: 0 bytes in 0 blocks ==1187113== still reachable: 24 bytes in 2 blocks ==1187113== suppressed: 700,719 bytes in 9,375 blocks ==1187113== Reachable blocks (those to which a pointer was found) are not shown. ==1187113== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1187113== ==1187113== For lists of detected and suppressed errors, rerun with: -s ==1187113== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)