==1199913== Memcheck, a memory error detector ==1199913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1199913== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1199913== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1199913== Parent PID: 1185596 ==1199913== ==1199913== ==1199913== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1199913== Open file descriptor 12: ==1199913== at 0x1019322D: pipe (pipe.c:29) ==1199913== by 0x18AFA07D: ??? ==1199913== by 0x1406C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1199913== by 0xF9B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1199913== by 0xF94FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1199913== by 0xE626D38: PetscInitialize (pinit.c:924) ==1199913== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1199913== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1199913== by 0x131B35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1199913== by 0x12B8FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1199913== by 0x12DE2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1199913== by 0x12DD2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1199913== by 0x12E33D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1199913== by 0x12A100: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==1199913== ==1199913== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1199913== at 0x10197BCC: __open_nocancel (open64_nocancel.c:39) ==1199913== by 0x1011BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1199913== by 0xF8B0822: ??? ==1199913== by 0xF8B096F: ??? ==1199913== by 0x141116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1199913== by 0x14111938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1199913== by 0x140C7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1199913== by 0x1406C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1199913== by 0xF9B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1199913== by 0xF94FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1199913== by 0xE626D38: PetscInitialize (pinit.c:924) ==1199913== by 0xE4FA71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1199913== by 0xE4FA76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1199913== by 0x131B35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1199913== by 0x12B8FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1199913== by 0x12DE2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1199913== by 0x12DD2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1199913== by 0x12E33D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1199913== by 0x12A100: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==1199913== ==1199913== Open file descriptor 114: ==1199913== ==1199913== ==1199913== Open file descriptor 110: ==1199913== ==1199913== ==1199913== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==1199913== ==1199913== ==1199913== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1199913== ==1199913== ==1199913== ==1199913== HEAP SUMMARY: ==1199913== in use at exit: 700,704 bytes in 9,374 blocks ==1199913== total heap usage: 11,063,256 allocs, 11,053,882 frees, 4,777,889,264 bytes allocated ==1199913== ==1199913== LEAK SUMMARY: ==1199913== definitely lost: 0 bytes in 0 blocks ==1199913== indirectly lost: 0 bytes in 0 blocks ==1199913== possibly lost: 0 bytes in 0 blocks ==1199913== still reachable: 56 bytes in 3 blocks ==1199913== suppressed: 700,648 bytes in 9,371 blocks ==1199913== Reachable blocks (those to which a pointer was found) are not shown. ==1199913== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1199913== ==1199913== For lists of detected and suppressed errors, rerun with: -s ==1199913== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 39)