==1187188== Memcheck, a memory error detector ==1187188== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1187188== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1187188== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==1187188== Parent PID: 1185596 ==1187188== ==1187188== ==1187188== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1187188== Open file descriptor 12: ==1187188== at 0xD2F122D: pipe (pipe.c:29) ==1187188== by 0x18AF907D: ??? ==1187188== by 0x140BE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187188== by 0x1057C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187188== by 0x10515D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187188== by 0xF20CD38: PetscInitialize (pinit.c:924) ==1187188== by 0xCEF971D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187188== by 0xCEF976B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187188== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187188== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187188== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187188== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187188== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187188== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==1187188== ==1187188== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1187188== at 0xD2F5BCC: __open_nocancel (open64_nocancel.c:39) ==1187188== by 0xD279C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1187188== by 0xCF31822: ??? ==1187188== by 0xCF3196F: ??? ==1187188== by 0x141636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187188== by 0x14163938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187188== by 0x14119922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187188== by 0x140BE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187188== by 0x1057C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187188== by 0x10515D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187188== by 0xF20CD38: PetscInitialize (pinit.c:924) ==1187188== by 0xCEF971D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187188== by 0xCEF976B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187188== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187188== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187188== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187188== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187188== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187188== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==1187188== ==1187188== Open file descriptor 114: ==1187188== ==1187188== ==1187188== Open file descriptor 110: ==1187188== ==1187188== ==1187188== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==1187188== ==1187188== ==1187188== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1187188== ==1187188== ==1187188== ==1187188== HEAP SUMMARY: ==1187188== in use at exit: 700,743 bytes in 9,377 blocks ==1187188== total heap usage: 60,167 allocs, 50,790 frees, 1,354,331,870 bytes allocated ==1187188== ==1187188== LEAK SUMMARY: ==1187188== definitely lost: 0 bytes in 0 blocks ==1187188== indirectly lost: 0 bytes in 0 blocks ==1187188== possibly lost: 0 bytes in 0 blocks ==1187188== still reachable: 24 bytes in 2 blocks ==1187188== suppressed: 700,719 bytes in 9,375 blocks ==1187188== Reachable blocks (those to which a pointer was found) are not shown. ==1187188== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1187188== ==1187188== For lists of detected and suppressed errors, rerun with: -s ==1187188== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)