==1250488== Memcheck, a memory error detector ==1250488== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1250488== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1250488== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==1250488== Parent PID: 1249332 ==1250488== ==1250488== ==1250488== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1250488== Open file descriptor 12: ==1250488== at 0xE6F822D: pipe (pipe.c:29) ==1250488== by 0x18A6E07D: ??? ==1250488== by 0x130104CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250488== by 0xE347418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250488== by 0xE2E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250488== by 0xCFD7D38: PetscInitialize (pinit.c:924) ==1250488== by 0xCE4C20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250488== by 0xCE4C25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250488== by 0x162F2B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1250488== by 0x15D6C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250488== by 0x1605FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250488== by 0x16049A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250488== by 0x160B31: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250488== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1250488== ==1250488== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1250488== at 0xE6FCBCC: __open_nocancel (open64_nocancel.c:39) ==1250488== by 0xE680C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1250488== by 0xCE81822: ??? ==1250488== by 0xCE8196F: ??? ==1250488== by 0x130B56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250488== by 0x130B5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250488== by 0x1306B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250488== by 0x130102DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250488== by 0xE347418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250488== by 0xE2E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250488== by 0xCFD7D38: PetscInitialize (pinit.c:924) ==1250488== by 0xCE4C20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250488== by 0xCE4C25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250488== by 0x162F2B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1250488== by 0x15D6C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250488== by 0x1605FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250488== by 0x16049A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250488== by 0x160B31: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250488== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1250488== ==1250488== Open file descriptor 114: ==1250488== ==1250488== ==1250488== Open file descriptor 110: ==1250488== ==1250488== ==1250488== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==1250488== ==1250488== ==1250488== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1250488== ==1250488== ==1250488== ==1250488== HEAP SUMMARY: ==1250488== in use at exit: 700,759 bytes in 9,378 blocks ==1250488== total heap usage: 549,174 allocs, 539,796 frees, 1,359,796,597 bytes allocated ==1250488== ==1250488== LEAK SUMMARY: ==1250488== definitely lost: 0 bytes in 0 blocks ==1250488== indirectly lost: 0 bytes in 0 blocks ==1250488== possibly lost: 0 bytes in 0 blocks ==1250488== still reachable: 56 bytes in 3 blocks ==1250488== suppressed: 700,703 bytes in 9,375 blocks ==1250488== Reachable blocks (those to which a pointer was found) are not shown. ==1250488== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1250488== ==1250488== For lists of detected and suppressed errors, rerun with: -s ==1250488== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)