==1250479== Memcheck, a memory error detector ==1250479== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1250479== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1250479== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==1250479== Parent PID: 1249332 ==1250479== ==1250479== ==1250479== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1250479== Open file descriptor 12: ==1250479== at 0xE47122D: pipe (pipe.c:29) ==1250479== by 0x18A6E07D: ??? ==1250479== by 0x12FBF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250479== by 0xE0C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250479== by 0xE05BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250479== by 0xCD32D38: PetscInitialize (pinit.c:924) ==1250479== by 0xCC0720F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250479== by 0xCC0725D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250479== by 0x119861: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1250479== by 0x115173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250479== by 0x117478: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250479== by 0x117373: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250479== by 0x117987: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250479== by 0x113975: main (TestCellSrn.cpp:18) ==1250479== ==1250479== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1250479== at 0xE475BCC: __open_nocancel (open64_nocancel.c:39) ==1250479== by 0xE3F9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1250479== by 0xDFBC822: ??? ==1250479== by 0xDFBC96F: ??? ==1250479== by 0x130646DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250479== by 0x13064938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250479== by 0x1301A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250479== by 0x12FBF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250479== by 0xE0C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250479== by 0xE05BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250479== by 0xCD32D38: PetscInitialize (pinit.c:924) ==1250479== by 0xCC0720F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250479== by 0xCC0725D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250479== by 0x119861: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1250479== by 0x115173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250479== by 0x117478: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250479== by 0x117373: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250479== by 0x117987: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250479== by 0x113975: main (TestCellSrn.cpp:18) ==1250479== ==1250479== Open file descriptor 114: ==1250479== ==1250479== ==1250479== Open file descriptor 110: ==1250479== ==1250479== ==1250479== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==1250479== ==1250479== ==1250479== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1250479== ==1250479== ==1250479== ==1250479== HEAP SUMMARY: ==1250479== in use at exit: 700,823 bytes in 9,379 blocks ==1250479== total heap usage: 65,125 allocs, 55,746 frees, 1,354,426,878 bytes allocated ==1250479== ==1250479== LEAK SUMMARY: ==1250479== definitely lost: 0 bytes in 0 blocks ==1250479== indirectly lost: 0 bytes in 0 blocks ==1250479== possibly lost: 0 bytes in 0 blocks ==1250479== still reachable: 120 bytes in 4 blocks ==1250479== suppressed: 700,703 bytes in 9,375 blocks ==1250479== Reachable blocks (those to which a pointer was found) are not shown. ==1250479== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1250479== ==1250479== For lists of detected and suppressed errors, rerun with: -s ==1250479== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)