==1251026== Memcheck, a memory error detector ==1251026== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1251026== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1251026== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDiscreteSystemForceCalculator -malloc_debug -malloc_dump -memory_info ==1251026== Parent PID: 1249332 ==1251026== ==1251026== ==1251026== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1251026== Open file descriptor 12: ==1251026== at 0x1007022D: pipe (pipe.c:29) ==1251026== by 0x18A6E07D: ??? ==1251026== by 0x13FD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1251026== by 0xF97A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251026== by 0xF913D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251026== by 0xE5EAD38: PetscInitialize (pinit.c:924) ==1251026== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1251026== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1251026== by 0x12A6A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1251026== by 0x124065: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1251026== by 0x126AF6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1251026== by 0x126996: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1251026== by 0x12702D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1251026== by 0x122395: main (TestDiscreteSystemForceCalculator.cpp:19) ==1251026== ==1251026== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1251026== at 0x10074BCC: __open_nocancel (open64_nocancel.c:39) ==1251026== by 0xFFF8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1251026== by 0xF874822: ??? ==1251026== by 0xF87496F: ??? ==1251026== by 0x140786DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251026== by 0x14078938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251026== by 0x1402E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251026== by 0x13FD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1251026== by 0xF97A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251026== by 0xF913D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251026== by 0xE5EAD38: PetscInitialize (pinit.c:924) ==1251026== by 0xE4C120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1251026== by 0xE4C125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1251026== by 0x12A6A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1251026== by 0x124065: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1251026== by 0x126AF6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1251026== by 0x126996: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1251026== by 0x12702D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1251026== by 0x122395: main (TestDiscreteSystemForceCalculator.cpp:19) ==1251026== ==1251026== Open file descriptor 114: ==1251026== ==1251026== ==1251026== Open file descriptor 110: ==1251026== ==1251026== ==1251026== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDiscreteSystemForceCalculator_valgrind.txt ==1251026== ==1251026== ==1251026== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1251026== ==1251026== ==1251026== ==1251026== HEAP SUMMARY: ==1251026== in use at exit: 700,759 bytes in 9,378 blocks ==1251026== total heap usage: 124,908 allocs, 115,530 frees, 1,360,534,423 bytes allocated ==1251026== ==1251026== LEAK SUMMARY: ==1251026== definitely lost: 0 bytes in 0 blocks ==1251026== indirectly lost: 0 bytes in 0 blocks ==1251026== possibly lost: 0 bytes in 0 blocks ==1251026== still reachable: 56 bytes in 3 blocks ==1251026== suppressed: 700,703 bytes in 9,375 blocks ==1251026== Reachable blocks (those to which a pointer was found) are not shown. ==1251026== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1251026== ==1251026== For lists of detected and suppressed errors, rerun with: -s ==1251026== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)