==1251740== Memcheck, a memory error detector ==1251740== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1251740== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1251740== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1251740== Parent PID: 1249332 ==1251740== ==1251740== ==1251740== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1251740== Open file descriptor 12: ==1251740== at 0xF08022D: pipe (pipe.c:29) ==1251740== by 0x18A6E07D: ??? ==1251740== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1251740== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251740== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251740== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==1251740== by 0xE85D20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1251740== by 0xE85D25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1251740== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1251740== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1251740== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1251740== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1251740== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1251740== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1251740== ==1251740== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1251740== at 0xF084BCC: __open_nocancel (open64_nocancel.c:39) ==1251740== by 0xF008C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1251740== by 0xE892822: ??? ==1251740== by 0xE89296F: ??? ==1251740== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251740== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251740== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1251740== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1251740== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251740== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1251740== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==1251740== by 0xE85D20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1251740== by 0xE85D25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1251740== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1251740== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1251740== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1251740== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1251740== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1251740== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1251740== ==1251740== Open file descriptor 114: ==1251740== ==1251740== ==1251740== Open file descriptor 110: ==1251740== ==1251740== ==1251740== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1251740== ==1251740== ==1251740== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1251740== ==1251740== ==1251740== ==1251740== HEAP SUMMARY: ==1251740== in use at exit: 700,688 bytes in 9,374 blocks ==1251740== total heap usage: 7,509,613 allocs, 7,500,239 frees, 2,662,360,500 bytes allocated ==1251740== ==1251740== LEAK SUMMARY: ==1251740== definitely lost: 0 bytes in 0 blocks ==1251740== indirectly lost: 0 bytes in 0 blocks ==1251740== possibly lost: 0 bytes in 0 blocks ==1251740== still reachable: 56 bytes in 3 blocks ==1251740== suppressed: 700,632 bytes in 9,371 blocks ==1251740== Reachable blocks (those to which a pointer was found) are not shown. ==1251740== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1251740== ==1251740== For lists of detected and suppressed errors, rerun with: -s ==1251740== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)