==1250928== Memcheck, a memory error detector ==1250928== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1250928== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1250928== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==1250928== Parent PID: 1249332 ==1250928== ==1250928== ==1250928== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1250928== Open file descriptor 12: ==1250928== at 0xD2B422D: pipe (pipe.c:29) ==1250928== by 0x18A6E07D: ??? ==1250928== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250928== by 0x10511418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250928== by 0x104AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250928== by 0xF1A1D38: PetscInitialize (pinit.c:924) ==1250928== by 0xCEBF20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250928== by 0xCEBF25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250928== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1250928== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250928== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250928== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250928== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250928== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==1250928== ==1250928== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1250928== at 0xD2B8BCC: __open_nocancel (open64_nocancel.c:39) ==1250928== by 0xD23CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1250928== by 0xCEF4822: ??? ==1250928== by 0xCEF496F: ??? ==1250928== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250928== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250928== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1250928== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1250928== by 0x10511418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250928== by 0x104AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1250928== by 0xF1A1D38: PetscInitialize (pinit.c:924) ==1250928== by 0xCEBF20F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1250928== by 0xCEBF25D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1250928== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1250928== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1250928== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1250928== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1250928== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1250928== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==1250928== ==1250928== Open file descriptor 114: ==1250928== ==1250928== ==1250928== Open file descriptor 110: ==1250928== ==1250928== ==1250928== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==1250928== ==1250928== ==1250928== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1250928== ==1250928== ==1250928== ==1250928== HEAP SUMMARY: ==1250928== in use at exit: 700,727 bytes in 9,377 blocks ==1250928== total heap usage: 60,195 allocs, 50,818 frees, 1,354,349,231 bytes allocated ==1250928== ==1250928== LEAK SUMMARY: ==1250928== definitely lost: 0 bytes in 0 blocks ==1250928== indirectly lost: 0 bytes in 0 blocks ==1250928== possibly lost: 0 bytes in 0 blocks ==1250928== still reachable: 24 bytes in 2 blocks ==1250928== suppressed: 700,703 bytes in 9,375 blocks ==1250928== Reachable blocks (those to which a pointer was found) are not shown. ==1250928== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1250928== ==1250928== For lists of detected and suppressed errors, rerun with: -s ==1250928== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)