==1330786== Memcheck, a memory error detector ==1330786== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1330786== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1330786== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1330786== Parent PID: 1310457 ==1330786== ==1330786== ==1330786== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1330786== Open file descriptor 12: ==1330786== at 0x105A422D: pipe (pipe.c:29) ==1330786== by 0x1A73207D: ??? ==1330786== by 0x159324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1330786== by 0x121FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1330786== by 0x12198D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1330786== by 0x10E8FD38: PetscInitialize (pinit.c:924) ==1330786== by 0xFD8120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1330786== by 0xFD8125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1330786== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1330786== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1330786== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1330786== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1330786== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1330786== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1330786== ==1330786== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1330786== at 0x105A8BCC: __open_nocancel (open64_nocancel.c:39) ==1330786== by 0x1052CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1330786== by 0xFDB6822: ??? ==1330786== by 0xFDB696F: ??? ==1330786== by 0x159D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1330786== by 0x159D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1330786== by 0x1598D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1330786== by 0x159322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1330786== by 0x121FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1330786== by 0x12198D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1330786== by 0x10E8FD38: PetscInitialize (pinit.c:924) ==1330786== by 0xFD8120F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1330786== by 0xFD8125D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1330786== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1330786== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1330786== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1330786== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1330786== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1330786== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1330786== ==1330786== Open file descriptor 114: ==1330786== ==1330786== ==1330786== Open file descriptor 110: ==1330786== ==1330786== ==1330786== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1330786== ==1330786== ==1330786== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1330786== ==1330786== ==1330786== ==1330786== HEAP SUMMARY: ==1330786== in use at exit: 700,704 bytes in 9,374 blocks ==1330786== total heap usage: 6,309,954 allocs, 6,300,580 frees, 2,072,857,044 bytes allocated ==1330786== ==1330786== LEAK SUMMARY: ==1330786== definitely lost: 0 bytes in 0 blocks ==1330786== indirectly lost: 0 bytes in 0 blocks ==1330786== possibly lost: 0 bytes in 0 blocks ==1330786== still reachable: 56 bytes in 3 blocks ==1330786== suppressed: 700,648 bytes in 9,371 blocks ==1330786== Reachable blocks (those to which a pointer was found) are not shown. ==1330786== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1330786== ==1330786== For lists of detected and suppressed errors, rerun with: -s ==1330786== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)