==1373308== Memcheck, a memory error detector ==1373308== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373308== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373308== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1373308== Parent PID: 1371689 ==1373308== ==1373308== ==1373308== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1373308== Open file descriptor 12: ==1373308== at 0xD36722D: pipe (pipe.c:29) ==1373308== by 0x18AF107D: ??? ==1373308== by 0x140F84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373308== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373308== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373308== by 0xF54AD38: PetscInitialize (pinit.c:924) ==1373308== by 0xCC28801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373308== by 0xCC2884F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373308== by 0x13D45A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373308== by 0x13502D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373308== by 0x137D58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373308== by 0x137C53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373308== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373308== by 0x133830: main (TestCaUpdateRules.cpp:18) ==1373308== ==1373308== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373308== at 0xD36BBCC: __open_nocancel (open64_nocancel.c:39) ==1373308== by 0xD2EFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373308== by 0xCC60822: ??? ==1373308== by 0xCC6096F: ??? ==1373308== by 0x1419D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373308== by 0x1419D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373308== by 0x14153922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373308== by 0x140F82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373308== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373308== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373308== by 0xF54AD38: PetscInitialize (pinit.c:924) ==1373308== by 0xCC28801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373308== by 0xCC2884F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373308== by 0x13D45A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373308== by 0x13502D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373308== by 0x137D58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373308== by 0x137C53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373308== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373308== by 0x133830: main (TestCaUpdateRules.cpp:18) ==1373308== ==1373308== Open file descriptor 114: ==1373308== ==1373308== ==1373308== Open file descriptor 110: ==1373308== ==1373308== ==1373308== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1373308== ==1373308== ==1373308== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373308== ==1373308== ==1373308== ==1373308== HEAP SUMMARY: ==1373308== in use at exit: 700,775 bytes in 9,378 blocks ==1373308== total heap usage: 57,496 allocs, 48,118 frees, 1,354,203,111 bytes allocated ==1373308== ==1373308== LEAK SUMMARY: ==1373308== definitely lost: 0 bytes in 0 blocks ==1373308== indirectly lost: 0 bytes in 0 blocks ==1373308== possibly lost: 0 bytes in 0 blocks ==1373308== still reachable: 56 bytes in 3 blocks ==1373308== suppressed: 700,719 bytes in 9,375 blocks ==1373308== Reachable blocks (those to which a pointer was found) are not shown. ==1373308== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373308== ==1373308== For lists of detected and suppressed errors, rerun with: -s ==1373308== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 43 from 43)