==1372685== Memcheck, a memory error detector ==1372685== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1372685== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1372685== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==1372685== Parent PID: 1371689 ==1372685== ==1372685== ==1372685== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1372685== Open file descriptor 12: ==1372685== at 0x6FCC22D: pipe (pipe.c:29) ==1372685== by 0x1019D07D: ??? ==1372685== by 0xC2CC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1372685== by 0x8A60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372685== by 0x89F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372685== by 0x7339D38: PetscInitialize (pinit.c:924) ==1372685== by 0x657D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1372685== by 0x657D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1372685== by 0x12A76A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1372685== by 0x125BDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1372685== by 0x128806: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1372685== by 0x128701: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1372685== by 0x128D15: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1372685== by 0x1243E0: main (TestHdf5Converters.cpp:18) ==1372685== ==1372685== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1372685== at 0x6FD0BCC: __open_nocancel (open64_nocancel.c:39) ==1372685== by 0x6F54C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1372685== by 0x65B5822: ??? ==1372685== by 0x65B596F: ??? ==1372685== by 0xC3716DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372685== by 0xC371938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372685== by 0xC327922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372685== by 0xC2CC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1372685== by 0x8A60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372685== by 0x89F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372685== by 0x7339D38: PetscInitialize (pinit.c:924) ==1372685== by 0x657D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1372685== by 0x657D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1372685== by 0x12A76A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1372685== by 0x125BDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1372685== by 0x128806: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1372685== by 0x128701: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1372685== by 0x128D15: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1372685== by 0x1243E0: main (TestHdf5Converters.cpp:18) ==1372685== ==1372685== Open file descriptor 114: ==1372685== ==1372685== ==1372685== Open file descriptor 110: ==1372685== ==1372685== ==1372685== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==1372685== ==1372685== ==1372685== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1372685== ==1372685== ==1372685== ==1372685== HEAP SUMMARY: ==1372685== in use at exit: 700,679 bytes in 9,377 blocks ==1372685== total heap usage: 207,449 allocs, 198,072 frees, 1,409,521,703 bytes allocated ==1372685== ==1372685== LEAK SUMMARY: ==1372685== definitely lost: 0 bytes in 0 blocks ==1372685== indirectly lost: 0 bytes in 0 blocks ==1372685== possibly lost: 0 bytes in 0 blocks ==1372685== still reachable: 24 bytes in 2 blocks ==1372685== suppressed: 700,655 bytes in 9,375 blocks ==1372685== Reachable blocks (those to which a pointer was found) are not shown. ==1372685== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1372685== ==1372685== For lists of detected and suppressed errors, rerun with: -s ==1372685== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)