==1394533== Memcheck, a memory error detector ==1394533== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1394533== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1394533== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1394533== Parent PID: 1371689 ==1394533== ==1394533== ==1394533== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1394533== Open file descriptor 12: ==1394533== at 0xA54722D: pipe (pipe.c:29) ==1394533== by 0x1401607D: ??? ==1394533== by 0xF8184CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1394533== by 0xBC50418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1394533== by 0xBBE9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1394533== by 0xA8E0D38: PetscInitialize (pinit.c:924) ==1394533== by 0x9E30801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1394533== by 0x9E3084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1394533== by 0x12EF4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1394533== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1394533== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1394533== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1394533== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1394533== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==1394533== ==1394533== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1394533== at 0xA54BBCC: __open_nocancel (open64_nocancel.c:39) ==1394533== by 0xA4CFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1394533== by 0x9E68822: ??? ==1394533== by 0x9E6896F: ??? ==1394533== by 0xF8BD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1394533== by 0xF8BD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1394533== by 0xF873922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1394533== by 0xF8182DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1394533== by 0xBC50418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1394533== by 0xBBE9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1394533== by 0xA8E0D38: PetscInitialize (pinit.c:924) ==1394533== by 0x9E30801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1394533== by 0x9E3084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1394533== by 0x12EF4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1394533== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1394533== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1394533== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1394533== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1394533== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==1394533== ==1394533== Open file descriptor 114: ==1394533== ==1394533== ==1394533== Open file descriptor 110: ==1394533== ==1394533== ==1394533== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1394533== ==1394533== ==1394533== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1394533== ==1394533== ==1394533== ==1394533== HEAP SUMMARY: ==1394533== in use at exit: 700,759 bytes in 9,377 blocks ==1394533== total heap usage: 122,359 allocs, 112,982 frees, 1,381,304,782 bytes allocated ==1394533== ==1394533== LEAK SUMMARY: ==1394533== definitely lost: 0 bytes in 0 blocks ==1394533== indirectly lost: 0 bytes in 0 blocks ==1394533== possibly lost: 0 bytes in 0 blocks ==1394533== still reachable: 24 bytes in 2 blocks ==1394533== suppressed: 700,735 bytes in 9,375 blocks ==1394533== Reachable blocks (those to which a pointer was found) are not shown. ==1394533== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1394533== ==1394533== For lists of detected and suppressed errors, rerun with: -s ==1394533== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)