==1391801== Memcheck, a memory error detector ==1391801== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1391801== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1391801== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==1391801== Parent PID: 1371689 ==1391801== ==1391801== ==1391801== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1391801== Open file descriptor 12: ==1391801== at 0x1033222D: pipe (pipe.c:29) ==1391801== by 0x1A7C507D: ??? ==1391801== by 0x149654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391801== by 0xFC3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391801== by 0xFBD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391801== by 0xE8CCD38: PetscInitialize (pinit.c:924) ==1391801== by 0xE73E801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391801== by 0xE73E84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391801== by 0x19DC4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391801== by 0x1942F7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391801== by 0x197A60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391801== by 0x197900: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391801== by 0x197F97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391801== by 0x1900E0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1391801== ==1391801== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1391801== at 0x10336BCC: __open_nocancel (open64_nocancel.c:39) ==1391801== by 0x102BAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1391801== by 0xE776822: ??? ==1391801== by 0xE77696F: ??? ==1391801== by 0x14A0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391801== by 0x14A0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391801== by 0x149C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391801== by 0x149652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391801== by 0xFC3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391801== by 0xFBD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391801== by 0xE8CCD38: PetscInitialize (pinit.c:924) ==1391801== by 0xE73E801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391801== by 0xE73E84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391801== by 0x19DC4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391801== by 0x1942F7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391801== by 0x197A60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391801== by 0x197900: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391801== by 0x197F97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391801== by 0x1900E0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1391801== ==1391801== Open file descriptor 114: ==1391801== ==1391801== ==1391801== Open file descriptor 110: ==1391801== ==1391801== ==1391801== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==1391801== ==1391801== ==1391801== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1391801== ==1391801== ==1391801== ==1391801== HEAP SUMMARY: ==1391801== in use at exit: 700,855 bytes in 9,379 blocks ==1391801== total heap usage: 863,775 allocs, 854,396 frees, 1,475,931,080 bytes allocated ==1391801== ==1391801== LEAK SUMMARY: ==1391801== definitely lost: 0 bytes in 0 blocks ==1391801== indirectly lost: 0 bytes in 0 blocks ==1391801== possibly lost: 0 bytes in 0 blocks ==1391801== still reachable: 120 bytes in 4 blocks ==1391801== suppressed: 700,735 bytes in 9,375 blocks ==1391801== Reachable blocks (those to which a pointer was found) are not shown. ==1391801== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1391801== ==1391801== For lists of detected and suppressed errors, rerun with: -s ==1391801== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)