==1373691== Memcheck, a memory error detector ==1373691== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373691== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373691== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1373691== Parent PID: 1371689 ==1373691== ==1373691== ==1373691== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1373691== Open file descriptor 12: ==1373691== at 0xED1622D: pipe (pipe.c:29) ==1373691== by 0x18AF307D: ??? ==1373691== by 0x140F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373691== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373691== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373691== by 0xF631D38: PetscInitialize (pinit.c:924) ==1373691== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373691== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373691== by 0x31B176: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373691== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373691== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373691== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373691== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373691== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==1373691== ==1373691== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373691== at 0xED1ABCC: __open_nocancel (open64_nocancel.c:39) ==1373691== by 0xEC9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373691== by 0xE528822: ??? ==1373691== by 0xE52896F: ??? ==1373691== by 0x141996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373691== by 0x14199938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373691== by 0x1414F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373691== by 0x140F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373691== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373691== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373691== by 0xF631D38: PetscInitialize (pinit.c:924) ==1373691== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373691== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373691== by 0x31B176: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373691== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373691== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373691== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373691== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373691== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==1373691== ==1373691== Open file descriptor 114: ==1373691== ==1373691== ==1373691== Open file descriptor 110: ==1373691== ==1373691== ==1373691== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1373691== ==1373691== ==1373691== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373691== ==1373691== ==1373691== ==1373691== HEAP SUMMARY: ==1373691== in use at exit: 700,704 bytes in 9,374 blocks ==1373691== total heap usage: 12,820,805 allocs, 12,811,431 frees, 3,863,500,458 bytes allocated ==1373691== ==1373691== LEAK SUMMARY: ==1373691== definitely lost: 0 bytes in 0 blocks ==1373691== indirectly lost: 0 bytes in 0 blocks ==1373691== possibly lost: 0 bytes in 0 blocks ==1373691== still reachable: 56 bytes in 3 blocks ==1373691== suppressed: 700,648 bytes in 9,371 blocks ==1373691== Reachable blocks (those to which a pointer was found) are not shown. ==1373691== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373691== ==1373691== For lists of detected and suppressed errors, rerun with: -s ==1373691== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)