==1377513== Memcheck, a memory error detector ==1377513== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1377513== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1377513== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1377513== Parent PID: 1371689 ==1377513== ==1377513== ==1377513== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1377513== Open file descriptor 12: ==1377513== at 0xF08122D: pipe (pipe.c:29) ==1377513== by 0x18AF107D: ??? ==1377513== by 0x140F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1377513== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1377513== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1377513== by 0xF631D38: PetscInitialize (pinit.c:924) ==1377513== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1377513== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1377513== by 0x140260: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1377513== by 0x1396C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1377513== by 0x13C522: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1377513== by 0x13C3C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1377513== by 0x13CA59: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1377513== by 0x1379C0: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1377513== ==1377513== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1377513== at 0xF085BCC: __open_nocancel (open64_nocancel.c:39) ==1377513== by 0xF009C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1377513== by 0xE8D5822: ??? ==1377513== by 0xE8D596F: ??? ==1377513== by 0x141996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1377513== by 0x14199938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1377513== by 0x1414F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1377513== by 0x140F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1377513== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1377513== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1377513== by 0xF631D38: PetscInitialize (pinit.c:924) ==1377513== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1377513== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1377513== by 0x140260: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1377513== by 0x1396C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1377513== by 0x13C522: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1377513== by 0x13C3C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1377513== by 0x13CA59: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1377513== by 0x1379C0: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1377513== ==1377513== Open file descriptor 114: ==1377513== ==1377513== ==1377513== Open file descriptor 110: ==1377513== ==1377513== ==1377513== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1377513== ==1377513== ==1377513== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1377513== ==1377513== ==1377513== ==1377513== HEAP SUMMARY: ==1377513== in use at exit: 700,775 bytes in 9,378 blocks ==1377513== total heap usage: 2,325,723 allocs, 2,316,345 frees, 1,786,429,872 bytes allocated ==1377513== ==1377513== LEAK SUMMARY: ==1377513== definitely lost: 0 bytes in 0 blocks ==1377513== indirectly lost: 0 bytes in 0 blocks ==1377513== possibly lost: 0 bytes in 0 blocks ==1377513== still reachable: 56 bytes in 3 blocks ==1377513== suppressed: 700,719 bytes in 9,375 blocks ==1377513== Reachable blocks (those to which a pointer was found) are not shown. ==1377513== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1377513== ==1377513== For lists of detected and suppressed errors, rerun with: -s ==1377513== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)