==1450846== Memcheck, a memory error detector ==1450846== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1450846== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1450846== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1450846== Parent PID: 1432588 ==1450846== ==1450846== ==1450846== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1450846== Open file descriptor 12: ==1450846== at 0xA45E22D: pipe (pipe.c:29) ==1450846== by 0x1401207D: ??? ==1450846== by 0xF8184CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1450846== by 0xBB67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1450846== by 0xBB00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1450846== by 0xA7F7D38: PetscInitialize (pinit.c:924) ==1450846== by 0x9D474FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1450846== by 0x9D4754B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1450846== by 0x12D264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1450846== by 0x12669D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1450846== by 0x12908A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1450846== by 0x128F85: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1450846== by 0x129599: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1450846== by 0x124EA0: main (TestCheckpointing.cpp:18) ==1450846== ==1450846== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1450846== at 0xA462BCC: __open_nocancel (open64_nocancel.c:39) ==1450846== by 0xA3E6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1450846== by 0x9D7F822: ??? ==1450846== by 0x9D7F96F: ??? ==1450846== by 0xF8BD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1450846== by 0xF8BD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1450846== by 0xF873922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1450846== by 0xF8182DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1450846== by 0xBB67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1450846== by 0xBB00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1450846== by 0xA7F7D38: PetscInitialize (pinit.c:924) ==1450846== by 0x9D474FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1450846== by 0x9D4754B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1450846== by 0x12D264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1450846== by 0x12669D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1450846== by 0x12908A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1450846== by 0x128F85: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1450846== by 0x129599: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1450846== by 0x124EA0: main (TestCheckpointing.cpp:18) ==1450846== ==1450846== Open file descriptor 114: ==1450846== ==1450846== ==1450846== Open file descriptor 110: ==1450846== ==1450846== ==1450846== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1450846== ==1450846== ==1450846== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1450846== ==1450846== ==1450846== ==1450846== HEAP SUMMARY: ==1450846== in use at exit: 701,239 bytes in 9,387 blocks ==1450846== total heap usage: 834,239 allocs, 824,852 frees, 1,457,885,529 bytes allocated ==1450846== ==1450846== LEAK SUMMARY: ==1450846== definitely lost: 0 bytes in 0 blocks ==1450846== indirectly lost: 0 bytes in 0 blocks ==1450846== possibly lost: 0 bytes in 0 blocks ==1450846== still reachable: 24 bytes in 2 blocks ==1450846== suppressed: 701,215 bytes in 9,385 blocks ==1450846== Reachable blocks (those to which a pointer was found) are not shown. ==1450846== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1450846== ==1450846== For lists of detected and suppressed errors, rerun with: -s ==1450846== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 62 from 36)