==1568777== Memcheck, a memory error detector ==1568777== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1568777== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1568777== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==1568777== Parent PID: 1552427 ==1568777== ==1568777== ==1568777== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1568777== Open file descriptor 12: ==1568777== at 0xB89122D: pipe (pipe.c:29) ==1568777== by 0x1401207D: ??? ==1568777== by 0xF7CB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1568777== by 0xB181418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568777== by 0xB11AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568777== by 0x9DF1D38: PetscInitialize (pinit.c:924) ==1568777== by 0x9CC54FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1568777== by 0x9CC554B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1568777== by 0x13425E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1568777== by 0x12D91D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1568777== by 0x1300AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1568777== by 0x12FFA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1568777== by 0x1305BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1568777== by 0x12C120: main (TestBidomainDistributedMesh.cpp:18) ==1568777== ==1568777== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1568777== at 0xB895BCC: __open_nocancel (open64_nocancel.c:39) ==1568777== by 0xB819C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1568777== by 0xB07B822: ??? ==1568777== by 0xB07B96F: ??? ==1568777== by 0xF8706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568777== by 0xF870938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568777== by 0xF826922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568777== by 0xF7CB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1568777== by 0xB181418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568777== by 0xB11AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568777== by 0x9DF1D38: PetscInitialize (pinit.c:924) ==1568777== by 0x9CC54FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1568777== by 0x9CC554B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1568777== by 0x13425E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1568777== by 0x12D91D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1568777== by 0x1300AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1568777== by 0x12FFA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1568777== by 0x1305BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1568777== by 0x12C120: main (TestBidomainDistributedMesh.cpp:18) ==1568777== ==1568777== Open file descriptor 114: ==1568777== ==1568777== ==1568777== Open file descriptor 110: ==1568777== ==1568777== ==1568777== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==1568777== ==1568777== ==1568777== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1568777== ==1568777== ==1568777== ==1568777== HEAP SUMMARY: ==1568777== in use at exit: 701,239 bytes in 9,387 blocks ==1568777== total heap usage: 430,120 allocs, 420,733 frees, 1,452,350,395 bytes allocated ==1568777== ==1568777== LEAK SUMMARY: ==1568777== definitely lost: 0 bytes in 0 blocks ==1568777== indirectly lost: 0 bytes in 0 blocks ==1568777== possibly lost: 0 bytes in 0 blocks ==1568777== still reachable: 24 bytes in 2 blocks ==1568777== suppressed: 701,215 bytes in 9,385 blocks ==1568777== Reachable blocks (those to which a pointer was found) are not shown. ==1568777== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1568777== ==1568777== For lists of detected and suppressed errors, rerun with: -s ==1568777== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 54 from 37)