==1554018== Memcheck, a memory error detector ==1554018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1554018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1554018== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==1554018== Parent PID: 1552427 ==1554018== ==1554018== ==1554018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1554018== Open file descriptor 12: ==1554018== at 0xED1F22D: pipe (pipe.c:29) ==1554018== by 0x18AF807D: ??? ==1554018== by 0x1410A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1554018== by 0x109A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554018== by 0x10942D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554018== by 0xF639D38: PetscInitialize (pinit.c:924) ==1554018== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1554018== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1554018== by 0x15DC92: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1554018== by 0x154EDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1554018== by 0x157EA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1554018== by 0x157D40: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1554018== by 0x1583D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1554018== by 0x153210: main (TestCellPopulationBoundaryConditions.cpp:19) ==1554018== ==1554018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1554018== at 0xED23BCC: __open_nocancel (open64_nocancel.c:39) ==1554018== by 0xECA7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1554018== by 0xE531822: ??? ==1554018== by 0xE53196F: ??? ==1554018== by 0x141AF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554018== by 0x141AF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554018== by 0x14165922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554018== by 0x1410A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1554018== by 0x109A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554018== by 0x10942D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554018== by 0xF639D38: PetscInitialize (pinit.c:924) ==1554018== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1554018== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1554018== by 0x15DC92: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1554018== by 0x154EDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1554018== by 0x157EA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1554018== by 0x157D40: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1554018== by 0x1583D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1554018== by 0x153210: main (TestCellPopulationBoundaryConditions.cpp:19) ==1554018== ==1554018== Open file descriptor 114: ==1554018== ==1554018== ==1554018== Open file descriptor 110: ==1554018== ==1554018== ==1554018== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==1554018== ==1554018== ==1554018== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1554018== ==1554018== ==1554018== ==1554018== HEAP SUMMARY: ==1554018== in use at exit: 700,775 bytes in 9,378 blocks ==1554018== total heap usage: 71,762 allocs, 62,384 frees, 1,357,423,967 bytes allocated ==1554018== ==1554018== LEAK SUMMARY: ==1554018== definitely lost: 0 bytes in 0 blocks ==1554018== indirectly lost: 0 bytes in 0 blocks ==1554018== possibly lost: 0 bytes in 0 blocks ==1554018== still reachable: 56 bytes in 3 blocks ==1554018== suppressed: 700,719 bytes in 9,375 blocks ==1554018== Reachable blocks (those to which a pointer was found) are not shown. ==1554018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1554018== ==1554018== For lists of detected and suppressed errors, rerun with: -s ==1554018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)