==1553558== Memcheck, a memory error detector ==1553558== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1553558== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1553558== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==1553558== Parent PID: 1552427 ==1553558== ==1553558== ==1553558== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1553558== Open file descriptor 12: ==1553558== at 0xE49E22D: pipe (pipe.c:29) ==1553558== by 0x18AFB07D: ??? ==1553558== by 0x130494CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1553558== by 0xE0EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553558== by 0xE088D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553558== by 0xCD5FD38: PetscInitialize (pinit.c:924) ==1553558== by 0xCC314FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1553558== by 0xCC3154B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1553558== by 0x1243B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1553558== by 0x11E55D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1553558== by 0x120A74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1553558== by 0x120970: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1553558== by 0x120F83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1553558== by 0x11CD60: main (TestCellSrn.cpp:18) ==1553558== ==1553558== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1553558== at 0xE4A2BCC: __open_nocancel (open64_nocancel.c:39) ==1553558== by 0xE426C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1553558== by 0xDFE9822: ??? ==1553558== by 0xDFE996F: ??? ==1553558== by 0x130EE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553558== by 0x130EE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553558== by 0x130A4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553558== by 0x130492DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1553558== by 0xE0EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553558== by 0xE088D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553558== by 0xCD5FD38: PetscInitialize (pinit.c:924) ==1553558== by 0xCC314FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1553558== by 0xCC3154B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1553558== by 0x1243B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1553558== by 0x11E55D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1553558== by 0x120A74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1553558== by 0x120970: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1553558== by 0x120F83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1553558== by 0x11CD60: main (TestCellSrn.cpp:18) ==1553558== ==1553558== Open file descriptor 114: ==1553558== ==1553558== ==1553558== Open file descriptor 110: ==1553558== ==1553558== ==1553558== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==1553558== ==1553558== ==1553558== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1553558== ==1553558== ==1553558== ==1553558== HEAP SUMMARY: ==1553558== in use at exit: 700,839 bytes in 9,379 blocks ==1553558== total heap usage: 65,123 allocs, 55,744 frees, 1,354,421,912 bytes allocated ==1553558== ==1553558== LEAK SUMMARY: ==1553558== definitely lost: 0 bytes in 0 blocks ==1553558== indirectly lost: 0 bytes in 0 blocks ==1553558== possibly lost: 0 bytes in 0 blocks ==1553558== still reachable: 120 bytes in 4 blocks ==1553558== suppressed: 700,719 bytes in 9,375 blocks ==1553558== Reachable blocks (those to which a pointer was found) are not shown. ==1553558== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1553558== ==1553558== For lists of detected and suppressed errors, rerun with: -s ==1553558== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)