==1553609== Memcheck, a memory error detector ==1553609== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1553609== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1553609== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==1553609== Parent PID: 1552427 ==1553609== ==1553609== ==1553609== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1553609== Open file descriptor 12: ==1553609== at 0xEBF422D: pipe (pipe.c:29) ==1553609== by 0x18AF807D: ??? ==1553609== by 0x1410A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1553609== by 0x108C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553609== by 0x1085BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553609== by 0xF552D38: PetscInitialize (pinit.c:924) ==1553609== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1553609== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1553609== by 0x12E2D0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1553609== by 0x127C4F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1553609== by 0x12A940: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1553609== by 0x12A7E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1553609== by 0x12AE77: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1553609== by 0x125F80: main (TestCellsGenerator.cpp:19) ==1553609== ==1553609== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1553609== at 0xEBF8BCC: __open_nocancel (open64_nocancel.c:39) ==1553609== by 0xEB7CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1553609== by 0xE531822: ??? ==1553609== by 0xE53196F: ??? ==1553609== by 0x141AF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553609== by 0x141AF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553609== by 0x14165922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1553609== by 0x1410A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1553609== by 0x108C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553609== by 0x1085BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1553609== by 0xF552D38: PetscInitialize (pinit.c:924) ==1553609== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1553609== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1553609== by 0x12E2D0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1553609== by 0x127C4F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1553609== by 0x12A940: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1553609== by 0x12A7E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1553609== by 0x12AE77: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1553609== by 0x125F80: main (TestCellsGenerator.cpp:19) ==1553609== ==1553609== Open file descriptor 114: ==1553609== ==1553609== ==1553609== Open file descriptor 110: ==1553609== ==1553609== ==1553609== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==1553609== ==1553609== ==1553609== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1553609== ==1553609== ==1553609== ==1553609== HEAP SUMMARY: ==1553609== in use at exit: 700,839 bytes in 9,379 blocks ==1553609== total heap usage: 71,005 allocs, 61,626 frees, 1,355,692,955 bytes allocated ==1553609== ==1553609== LEAK SUMMARY: ==1553609== definitely lost: 0 bytes in 0 blocks ==1553609== indirectly lost: 0 bytes in 0 blocks ==1553609== possibly lost: 0 bytes in 0 blocks ==1553609== still reachable: 120 bytes in 4 blocks ==1553609== suppressed: 700,719 bytes in 9,375 blocks ==1553609== Reachable blocks (those to which a pointer was found) are not shown. ==1553609== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1553609== ==1553609== For lists of detected and suppressed errors, rerun with: -s ==1553609== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)