==1552430== Memcheck, a memory error detector ==1552430== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1552430== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1552430== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==1552430== Parent PID: 1552427 ==1552430== ==1552430== ==1552430== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1552430== Open file descriptor 12: ==1552430== at 0x4CBF22D: pipe (pipe.c:29) ==1552430== by 0xAED207D: ??? ==1552430== by 0x89E64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1552430== by 0x6299418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552430== by 0x6232D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552430== by 0x4F29D38: PetscInitialize (pinit.c:924) ==1552430== by 0x49074FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1552430== by 0x490754B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1552430== by 0x122F5D: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==1552430== by 0x12380A: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==1552430== by 0x11ADF4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==1552430== by 0x11E1F4: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==1552430== by 0x11E0D9: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==1552430== by 0x11DF7F: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==1552430== by 0x11DE41: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1552430== by 0x11E455: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1552430== by 0x119DC0: main (TestCitations.cpp:18) ==1552430== ==1552430== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1552430== at 0x4CC3BCC: __open_nocancel (open64_nocancel.c:39) ==1552430== by 0x4C47C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1552430== by 0x493F822: ??? ==1552430== by 0x493F96F: ??? ==1552430== by 0x8A8B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552430== by 0x8A8B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552430== by 0x8A41922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552430== by 0x89E62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1552430== by 0x6299418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552430== by 0x6232D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552430== by 0x4F29D38: PetscInitialize (pinit.c:924) ==1552430== by 0x49074FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1552430== by 0x490754B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1552430== by 0x122F5D: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==1552430== by 0x12380A: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==1552430== by 0x11ADF4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==1552430== by 0x11E1F4: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==1552430== by 0x11E0D9: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==1552430== by 0x11DF7F: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==1552430== by 0x11DE41: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1552430== by 0x11E455: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1552430== by 0x119DC0: main (TestCitations.cpp:18) ==1552430== ==1552430== Open file descriptor 114: ==1552430== ==1552430== ==1552430== Open file descriptor 110: ==1552430== ==1552430== ==1552430== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==1552430== ==1552430== ==1552430== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1552430== ==1552430== ==1552430== ==1552430== HEAP SUMMARY: ==1552430== in use at exit: 700,279 bytes in 9,377 blocks ==1552430== total heap usage: 47,469 allocs, 38,092 frees, 1,353,388,652 bytes allocated ==1552430== ==1552430== LEAK SUMMARY: ==1552430== definitely lost: 0 bytes in 0 blocks ==1552430== indirectly lost: 0 bytes in 0 blocks ==1552430== possibly lost: 0 bytes in 0 blocks ==1552430== still reachable: 24 bytes in 2 blocks ==1552430== suppressed: 700,255 bytes in 9,375 blocks ==1552430== Reachable blocks (those to which a pointer was found) are not shown. ==1552430== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1552430== ==1552430== For lists of detected and suppressed errors, rerun with: -s ==1552430== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)