==1567736== Memcheck, a memory error detector ==1567736== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1567736== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1567736== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1567736== Parent PID: 1552427 ==1567736== ==1567736== ==1567736== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1567736== Open file descriptor 12: ==1567736== at 0x1041722D: pipe (pipe.c:29) ==1567736== by 0x18AF807D: ??? ==1567736== by 0x140B44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1567736== by 0xFC3A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1567736== by 0xFBD3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1567736== by 0xE8CAD38: PetscInitialize (pinit.c:924) ==1567736== by 0xE73C4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1567736== by 0xE73C54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1567736== by 0x26B451: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1567736== by 0x2624B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1567736== by 0x2671A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1567736== by 0x267047: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1567736== by 0x2676DD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1567736== by 0x25DFE0: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1567736== ==1567736== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1567736== at 0x1041BBCC: __open_nocancel (open64_nocancel.c:39) ==1567736== by 0x1039FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1567736== by 0xE774822: ??? ==1567736== by 0xE77496F: ??? ==1567736== by 0x141596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1567736== by 0x14159938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1567736== by 0x1410F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1567736== by 0x140B42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1567736== by 0xFC3A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1567736== by 0xFBD3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1567736== by 0xE8CAD38: PetscInitialize (pinit.c:924) ==1567736== by 0xE73C4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1567736== by 0xE73C54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1567736== by 0x26B451: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1567736== by 0x2624B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1567736== by 0x2671A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1567736== by 0x267047: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1567736== by 0x2676DD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1567736== by 0x25DFE0: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1567736== ==1567736== Open file descriptor 114: ==1567736== ==1567736== ==1567736== Open file descriptor 110: ==1567736== ==1567736== ==1567736== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1567736== ==1567736== ==1567736== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1567736== ==1567736== ==1567736== ==1567736== HEAP SUMMARY: ==1567736== in use at exit: 700,704 bytes in 9,374 blocks ==1567736== total heap usage: 3,812,825 allocs, 3,803,451 frees, 1,523,742,066 bytes allocated ==1567736== ==1567736== LEAK SUMMARY: ==1567736== definitely lost: 0 bytes in 0 blocks ==1567736== indirectly lost: 0 bytes in 0 blocks ==1567736== possibly lost: 0 bytes in 0 blocks ==1567736== still reachable: 56 bytes in 3 blocks ==1567736== suppressed: 700,648 bytes in 9,371 blocks ==1567736== Reachable blocks (those to which a pointer was found) are not shown. ==1567736== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1567736== ==1567736== For lists of detected and suppressed errors, rerun with: -s ==1567736== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)