==1552938== Memcheck, a memory error detector ==1552938== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1552938== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1552938== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==1552938== Parent PID: 1552427 ==1552938== ==1552938== ==1552938== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1552938== Open file descriptor 12: ==1552938== at 0x7E6622D: pipe (pipe.c:29) ==1552938== by 0xFD6E07D: ??? ==1552938== by 0xB6A54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1552938== by 0x768B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552938== by 0x7624D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552938== by 0x62F9D38: PetscInitialize (pinit.c:924) ==1552938== by 0x61CD4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1552938== by 0x61CD54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1552938== by 0x125F3F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1552938== by 0x11FA2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1552938== by 0x1228D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1552938== by 0x122776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1552938== by 0x122E0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1552938== by 0x11DD60: main (TestHoneycombMeshGenerator.cpp:19) ==1552938== ==1552938== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1552938== at 0x7E6ABCC: __open_nocancel (open64_nocancel.c:39) ==1552938== by 0x7DEEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1552938== by 0x7583822: ??? ==1552938== by 0x758396F: ??? ==1552938== by 0xB74C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552938== by 0xB74C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552938== by 0xB702922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1552938== by 0xB6A52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1552938== by 0x768B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552938== by 0x7624D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1552938== by 0x62F9D38: PetscInitialize (pinit.c:924) ==1552938== by 0x61CD4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1552938== by 0x61CD54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1552938== by 0x125F3F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1552938== by 0x11FA2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1552938== by 0x1228D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1552938== by 0x122776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1552938== by 0x122E0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1552938== by 0x11DD60: main (TestHoneycombMeshGenerator.cpp:19) ==1552938== ==1552938== Open file descriptor 114: ==1552938== ==1552938== ==1552938== Open file descriptor 110: ==1552938== ==1552938== ==1552938== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombMeshGenerator_valgrind.txt ==1552938== ==1552938== ==1552938== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1552938== ==1552938== ==1552938== ==1552938== HEAP SUMMARY: ==1552938== in use at exit: 703,199 bytes in 9,378 blocks ==1552938== total heap usage: 1,202,072 allocs, 1,192,694 frees, 1,393,925,712 bytes allocated ==1552938== ==1552938== LEAK SUMMARY: ==1552938== definitely lost: 0 bytes in 0 blocks ==1552938== indirectly lost: 0 bytes in 0 blocks ==1552938== possibly lost: 0 bytes in 0 blocks ==1552938== still reachable: 2,576 bytes in 3 blocks ==1552938== suppressed: 700,623 bytes in 9,375 blocks ==1552938== Reachable blocks (those to which a pointer was found) are not shown. ==1552938== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1552938== ==1552938== For lists of detected and suppressed errors, rerun with: -s ==1552938== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)