==1554692== Memcheck, a memory error detector ==1554692== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1554692== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1554692== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1554692== Parent PID: 1552427 ==1554692== ==1554692== ==1554692== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1554692== Open file descriptor 12: ==1554692== at 0xF0CB22D: pipe (pipe.c:29) ==1554692== by 0x18AF907D: ??? ==1554692== by 0x141034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1554692== by 0x109A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554692== by 0x10942D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554692== by 0xF639D38: PetscInitialize (pinit.c:924) ==1554692== by 0xE8A54FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1554692== by 0xE8A554B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1554692== by 0x22FEA8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1554692== by 0x227E6B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1554692== by 0x22BB42: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1554692== by 0x22B9E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1554692== by 0x22C079: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1554692== by 0x226120: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1554692== ==1554692== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1554692== at 0xF0CFBCC: __open_nocancel (open64_nocancel.c:39) ==1554692== by 0xF053C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1554692== by 0xE8DD822: ??? ==1554692== by 0xE8DD96F: ??? ==1554692== by 0x141A86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554692== by 0x141A8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554692== by 0x1415E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1554692== by 0x141032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1554692== by 0x109A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554692== by 0x10942D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1554692== by 0xF639D38: PetscInitialize (pinit.c:924) ==1554692== by 0xE8A54FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1554692== by 0xE8A554B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1554692== by 0x22FEA8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1554692== by 0x227E6B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1554692== by 0x22BB42: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1554692== by 0x22B9E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1554692== by 0x22C079: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1554692== by 0x226120: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1554692== ==1554692== Open file descriptor 114: ==1554692== ==1554692== ==1554692== Open file descriptor 110: ==1554692== ==1554692== ==1554692== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1554692== ==1554692== ==1554692== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1554692== ==1554692== ==1554692== ==1554692== HEAP SUMMARY: ==1554692== in use at exit: 700,704 bytes in 9,374 blocks ==1554692== total heap usage: 7,459,897 allocs, 7,450,523 frees, 2,652,994,016 bytes allocated ==1554692== ==1554692== LEAK SUMMARY: ==1554692== definitely lost: 0 bytes in 0 blocks ==1554692== indirectly lost: 0 bytes in 0 blocks ==1554692== possibly lost: 0 bytes in 0 blocks ==1554692== still reachable: 56 bytes in 3 blocks ==1554692== suppressed: 700,648 bytes in 9,371 blocks ==1554692== Reachable blocks (those to which a pointer was found) are not shown. ==1554692== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1554692== ==1554692== For lists of detected and suppressed errors, rerun with: -s ==1554692== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)