==1568106== Memcheck, a memory error detector ==1568106== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1568106== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1568106== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1568106== Parent PID: 1552427 ==1568106== ==1568106== ==1568106== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1568106== Open file descriptor 12: ==1568106== at 0x11C0122D: pipe (pipe.c:29) ==1568106== by 0x1A7CC07D: ??? ==1568106== by 0x1597F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1568106== by 0x1150D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568106== by 0x114A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568106== by 0x1019BD38: PetscInitialize (pinit.c:924) ==1568106== by 0x1000D4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1568106== by 0x1000D54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1568106== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1568106== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1568106== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1568106== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1568106== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1568106== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1568106== ==1568106== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1568106== at 0x11C05BCC: __open_nocancel (open64_nocancel.c:39) ==1568106== by 0x11B89C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1568106== by 0x10045822: ??? ==1568106== by 0x1004596F: ??? ==1568106== by 0x15A246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568106== by 0x15A24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568106== by 0x159DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1568106== by 0x1597F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1568106== by 0x1150D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568106== by 0x114A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1568106== by 0x1019BD38: PetscInitialize (pinit.c:924) ==1568106== by 0x1000D4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1568106== by 0x1000D54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1568106== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1568106== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1568106== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1568106== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1568106== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1568106== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1568106== ==1568106== Open file descriptor 114: ==1568106== ==1568106== ==1568106== Open file descriptor 110: ==1568106== ==1568106== ==1568106== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1568106== ==1568106== ==1568106== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1568106== ==1568106== ==1568106== ==1568106== HEAP SUMMARY: ==1568106== in use at exit: 700,759 bytes in 9,377 blocks ==1568106== total heap usage: 520,951 allocs, 511,574 frees, 1,562,076,436 bytes allocated ==1568106== ==1568106== LEAK SUMMARY: ==1568106== definitely lost: 0 bytes in 0 blocks ==1568106== indirectly lost: 0 bytes in 0 blocks ==1568106== possibly lost: 0 bytes in 0 blocks ==1568106== still reachable: 24 bytes in 2 blocks ==1568106== suppressed: 700,735 bytes in 9,375 blocks ==1568106== Reachable blocks (those to which a pointer was found) are not shown. ==1568106== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1568106== ==1568106== For lists of detected and suppressed errors, rerun with: -s ==1568106== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)