==1603212== Memcheck, a memory error detector ==1603212== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1603212== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1603212== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==1603212== Parent PID: 1587442 ==1603212== ==1603212== ==1603212== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1603212== Open file descriptor 12: ==1603212== at 0x119BE22D: pipe (pipe.c:29) ==1603212== by 0x1A7CC07D: ??? ==1603212== by 0x159344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1603212== by 0x112C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603212== by 0x11261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603212== by 0xFF58D38: PetscInitialize (pinit.c:924) ==1603212== by 0xFDCA4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1603212== by 0xFDCA54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1603212== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1603212== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1603212== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1603212== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1603212== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1603212== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1603212== ==1603212== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1603212== at 0x119C2BCC: __open_nocancel (open64_nocancel.c:39) ==1603212== by 0x11946C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1603212== by 0xFE02822: ??? ==1603212== by 0xFE0296F: ??? ==1603212== by 0x159D96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603212== by 0x159D9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603212== by 0x1598F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603212== by 0x159342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1603212== by 0x112C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603212== by 0x11261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603212== by 0xFF58D38: PetscInitialize (pinit.c:924) ==1603212== by 0xFDCA4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1603212== by 0xFDCA54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1603212== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1603212== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1603212== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1603212== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1603212== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1603212== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1603212== ==1603212== Open file descriptor 114: ==1603212== ==1603212== ==1603212== Open file descriptor 110: ==1603212== ==1603212== ==1603212== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==1603212== ==1603212== ==1603212== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1603212== ==1603212== ==1603212== ==1603212== HEAP SUMMARY: ==1603212== in use at exit: 700,720 bytes in 9,374 blocks ==1603212== total heap usage: 4,061,157 allocs, 4,051,783 frees, 1,967,830,771 bytes allocated ==1603212== ==1603212== LEAK SUMMARY: ==1603212== definitely lost: 0 bytes in 0 blocks ==1603212== indirectly lost: 0 bytes in 0 blocks ==1603212== possibly lost: 0 bytes in 0 blocks ==1603212== still reachable: 56 bytes in 3 blocks ==1603212== suppressed: 700,664 bytes in 9,371 blocks ==1603212== Reachable blocks (those to which a pointer was found) are not shown. ==1603212== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1603212== ==1603212== For lists of detected and suppressed errors, rerun with: -s ==1603212== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)