==1605596== Memcheck, a memory error detector ==1605596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1605596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1605596== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1605596== Parent PID: 1587442 ==1605596== ==1605596== ==1605596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1605596== Open file descriptor 12: ==1605596== at 0xA54522D: pipe (pipe.c:29) ==1605596== by 0x1401207D: ??? ==1605596== by 0xF8164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1605596== by 0xBC4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1605596== by 0xBBE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1605596== by 0xA8DED38: PetscInitialize (pinit.c:924) ==1605596== by 0x9E2E4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1605596== by 0x9E2E54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1605596== by 0x12EF7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1605596== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1605596== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1605596== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1605596== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1605596== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==1605596== ==1605596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1605596== at 0xA549BCC: __open_nocancel (open64_nocancel.c:39) ==1605596== by 0xA4CDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1605596== by 0x9E66822: ??? ==1605596== by 0x9E6696F: ??? ==1605596== by 0xF8BB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1605596== by 0xF8BB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1605596== by 0xF871922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1605596== by 0xF8162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1605596== by 0xBC4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1605596== by 0xBBE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1605596== by 0xA8DED38: PetscInitialize (pinit.c:924) ==1605596== by 0x9E2E4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1605596== by 0x9E2E54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1605596== by 0x12EF7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1605596== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1605596== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1605596== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1605596== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1605596== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==1605596== ==1605596== Open file descriptor 114: ==1605596== ==1605596== ==1605596== Open file descriptor 110: ==1605596== ==1605596== ==1605596== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1605596== ==1605596== ==1605596== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1605596== ==1605596== ==1605596== ==1605596== HEAP SUMMARY: ==1605596== in use at exit: 700,759 bytes in 9,377 blocks ==1605596== total heap usage: 122,359 allocs, 112,982 frees, 1,381,312,171 bytes allocated ==1605596== ==1605596== LEAK SUMMARY: ==1605596== definitely lost: 0 bytes in 0 blocks ==1605596== indirectly lost: 0 bytes in 0 blocks ==1605596== possibly lost: 0 bytes in 0 blocks ==1605596== still reachable: 24 bytes in 2 blocks ==1605596== suppressed: 700,735 bytes in 9,375 blocks ==1605596== Reachable blocks (those to which a pointer was found) are not shown. ==1605596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1605596== ==1605596== For lists of detected and suppressed errors, rerun with: -s ==1605596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)