==1588070== Memcheck, a memory error detector ==1588070== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1588070== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1588070== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombVertexMeshGenerator -malloc_debug -malloc_dump -memory_info ==1588070== Parent PID: 1587442 ==1588070== ==1588070== ==1588070== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1588070== Open file descriptor 12: ==1588070== at 0x68CA22D: pipe (pipe.c:29) ==1588070== by 0xFD6E07D: ??? ==1588070== by 0xB6F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1588070== by 0x7F25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588070== by 0x7EBED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588070== by 0x6BB5D38: PetscInitialize (pinit.c:924) ==1588070== by 0x61CD4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1588070== by 0x61CD54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1588070== by 0x11DCA4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1588070== by 0x11811D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1588070== by 0x11A804: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1588070== by 0x11A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1588070== by 0x11AD13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1588070== by 0x116920: main (TestHoneycombVertexMeshGenerator.cpp:18) ==1588070== ==1588070== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1588070== at 0x68CEBCC: __open_nocancel (open64_nocancel.c:39) ==1588070== by 0x6852C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1588070== by 0x6205822: ??? ==1588070== by 0x620596F: ??? ==1588070== by 0xB7996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588070== by 0xB799938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588070== by 0xB74F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588070== by 0xB6F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1588070== by 0x7F25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588070== by 0x7EBED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588070== by 0x6BB5D38: PetscInitialize (pinit.c:924) ==1588070== by 0x61CD4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1588070== by 0x61CD54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1588070== by 0x11DCA4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1588070== by 0x11811D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1588070== by 0x11A804: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1588070== by 0x11A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1588070== by 0x11AD13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1588070== by 0x116920: main (TestHoneycombVertexMeshGenerator.cpp:18) ==1588070== ==1588070== Open file descriptor 114: ==1588070== ==1588070== ==1588070== Open file descriptor 110: ==1588070== ==1588070== ==1588070== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombVertexMeshGenerator_valgrind.txt ==1588070== ==1588070== ==1588070== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1588070== ==1588070== ==1588070== ==1588070== HEAP SUMMARY: ==1588070== in use at exit: 700,647 bytes in 9,377 blocks ==1588070== total heap usage: 413,889 allocs, 404,512 frees, 1,372,590,231 bytes allocated ==1588070== ==1588070== LEAK SUMMARY: ==1588070== definitely lost: 0 bytes in 0 blocks ==1588070== indirectly lost: 0 bytes in 0 blocks ==1588070== possibly lost: 0 bytes in 0 blocks ==1588070== still reachable: 24 bytes in 2 blocks ==1588070== suppressed: 700,623 bytes in 9,375 blocks ==1588070== Reachable blocks (those to which a pointer was found) are not shown. ==1588070== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1588070== ==1588070== For lists of detected and suppressed errors, rerun with: -s ==1588070== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)