==1589221== Memcheck, a memory error detector ==1589221== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1589221== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1589221== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==1589221== Parent PID: 1587442 ==1589221== ==1589221== ==1589221== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1589221== Open file descriptor 12: ==1589221== at 0x100AB22D: pipe (pipe.c:29) ==1589221== by 0x18AF807D: ??? ==1589221== by 0x1406C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1589221== by 0xF9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1589221== by 0xF94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1589221== by 0xE625D38: PetscInitialize (pinit.c:924) ==1589221== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1589221== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1589221== by 0x13A30D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1589221== by 0x133CDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1589221== by 0x13665A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1589221== by 0x136556: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1589221== by 0x136B69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1589221== by 0x1324E0: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==1589221== ==1589221== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1589221== at 0x100AFBCC: __open_nocancel (open64_nocancel.c:39) ==1589221== by 0x10033C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1589221== by 0xF8AF822: ??? ==1589221== by 0xF8AF96F: ??? ==1589221== by 0x141116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1589221== by 0x14111938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1589221== by 0x140C7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1589221== by 0x1406C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1589221== by 0xF9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1589221== by 0xF94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1589221== by 0xE625D38: PetscInitialize (pinit.c:924) ==1589221== by 0xE4F94FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1589221== by 0xE4F954B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1589221== by 0x13A30D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1589221== by 0x133CDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1589221== by 0x13665A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1589221== by 0x136556: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1589221== by 0x136B69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1589221== by 0x1324E0: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==1589221== ==1589221== Open file descriptor 114: ==1589221== ==1589221== ==1589221== Open file descriptor 110: ==1589221== ==1589221== ==1589221== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==1589221== ==1589221== ==1589221== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1589221== ==1589221== ==1589221== ==1589221== HEAP SUMMARY: ==1589221== in use at exit: 700,775 bytes in 9,378 blocks ==1589221== total heap usage: 62,495 allocs, 53,117 frees, 1,354,341,171 bytes allocated ==1589221== ==1589221== LEAK SUMMARY: ==1589221== definitely lost: 0 bytes in 0 blocks ==1589221== indirectly lost: 0 bytes in 0 blocks ==1589221== possibly lost: 0 bytes in 0 blocks ==1589221== still reachable: 56 bytes in 3 blocks ==1589221== suppressed: 700,719 bytes in 9,375 blocks ==1589221== Reachable blocks (those to which a pointer was found) are not shown. ==1589221== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1589221== ==1589221== For lists of detected and suppressed errors, rerun with: -s ==1589221== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)