==1603561== Memcheck, a memory error detector ==1603561== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1603561== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1603561== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1603561== Parent PID: 1587442 ==1603561== ==1603561== ==1603561== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1603561== Open file descriptor 12: ==1603561== at 0x1197C22D: pipe (pipe.c:29) ==1603561== by 0x1A7CC07D: ??? ==1603561== by 0x159344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1603561== by 0x11286418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603561== by 0x1121FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603561== by 0xFEF6D38: PetscInitialize (pinit.c:924) ==1603561== by 0xFDCA4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1603561== by 0xFDCA54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1603561== by 0x12A717: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1603561== by 0x12485D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1603561== by 0x126CCE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1603561== by 0x126BCA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1603561== by 0x1271DD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1603561== by 0x123060: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1603561== ==1603561== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1603561== at 0x11980BCC: __open_nocancel (open64_nocancel.c:39) ==1603561== by 0x11904C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1603561== by 0x11180822: ??? ==1603561== by 0x1118096F: ??? ==1603561== by 0x159D96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603561== by 0x159D9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603561== by 0x1598F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1603561== by 0x159342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1603561== by 0x11286418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603561== by 0x1121FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1603561== by 0xFEF6D38: PetscInitialize (pinit.c:924) ==1603561== by 0xFDCA4FD: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1603561== by 0xFDCA54B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1603561== by 0x12A717: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1603561== by 0x12485D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1603561== by 0x126CCE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1603561== by 0x126BCA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1603561== by 0x1271DD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1603561== by 0x123060: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1603561== ==1603561== Open file descriptor 114: ==1603561== ==1603561== ==1603561== Open file descriptor 110: ==1603561== ==1603561== ==1603561== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==1603561== ==1603561== ==1603561== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1603561== ==1603561== ==1603561== ==1603561== HEAP SUMMARY: ==1603561== in use at exit: 700,871 bytes in 9,379 blocks ==1603561== total heap usage: 1,617,816 allocs, 1,608,437 frees, 1,472,810,991 bytes allocated ==1603561== ==1603561== LEAK SUMMARY: ==1603561== definitely lost: 0 bytes in 0 blocks ==1603561== indirectly lost: 0 bytes in 0 blocks ==1603561== possibly lost: 0 bytes in 0 blocks ==1603561== still reachable: 136 bytes in 4 blocks ==1603561== suppressed: 700,735 bytes in 9,375 blocks ==1603561== Reachable blocks (those to which a pointer was found) are not shown. ==1603561== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1603561== ==1603561== For lists of detected and suppressed errors, rerun with: -s ==1603561== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)