==1680706== Memcheck, a memory error detector ==1680706== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1680706== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1680706== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1680706== Parent PID: 1664931 ==1680706== ==1680706== ==1680706== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1680706== Open file descriptor 12: ==1680706== at 0x1197922D: pipe (pipe.c:29) ==1680706== by 0x1A73607D: ??? ==1680706== by 0x1589A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680706== by 0x11283418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680706== by 0x1121CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680706== by 0xFF13D38: PetscInitialize (pinit.c:924) ==1680706== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680706== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680706== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1680706== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680706== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680706== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680706== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680706== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1680706== ==1680706== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1680706== at 0x1197DBCC: __open_nocancel (open64_nocancel.c:39) ==1680706== by 0x11901C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1680706== by 0xFDBD822: ??? ==1680706== by 0xFDBD96F: ??? ==1680706== by 0x1593F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680706== by 0x1593F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680706== by 0x158F5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680706== by 0x1589A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680706== by 0x11283418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680706== by 0x1121CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680706== by 0xFF13D38: PetscInitialize (pinit.c:924) ==1680706== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680706== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680706== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1680706== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680706== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680706== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680706== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680706== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1680706== ==1680706== Open file descriptor 114: ==1680706== ==1680706== ==1680706== Open file descriptor 110: ==1680706== ==1680706== ==1680706== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1680706== ==1680706== ==1680706== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1680706== ==1680706== ==1680706== ==1680706== HEAP SUMMARY: ==1680706== in use at exit: 700,704 bytes in 9,374 blocks ==1680706== total heap usage: 3,719,508 allocs, 3,710,134 frees, 1,636,689,512 bytes allocated ==1680706== ==1680706== LEAK SUMMARY: ==1680706== definitely lost: 0 bytes in 0 blocks ==1680706== indirectly lost: 0 bytes in 0 blocks ==1680706== possibly lost: 0 bytes in 0 blocks ==1680706== still reachable: 56 bytes in 3 blocks ==1680706== suppressed: 700,648 bytes in 9,371 blocks ==1680706== Reachable blocks (those to which a pointer was found) are not shown. ==1680706== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1680706== ==1680706== For lists of detected and suppressed errors, rerun with: -s ==1680706== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)