==1681360== Memcheck, a memory error detector ==1681360== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1681360== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1681360== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1681360== Parent PID: 1664931 ==1681360== ==1681360== ==1681360== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1681360== Open file descriptor 12: ==1681360== at 0xA5E522D: pipe (pipe.c:29) ==1681360== by 0x13F8107D: ??? ==1681360== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1681360== by 0x9ED5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1681360== by 0x9E6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1681360== by 0xA96FD38: PetscInitialize (pinit.c:924) ==1681360== by 0x9D9AFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1681360== by 0x9D9B01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1681360== by 0x1248E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1681360== by 0x11F993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1681360== by 0x1225FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1681360== by 0x1224F7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1681360== by 0x122B0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1681360== by 0x11E195: main (TestExtendedBidomainProblem.cpp:18) ==1681360== ==1681360== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1681360== at 0xA5E9BCC: __open_nocancel (open64_nocancel.c:39) ==1681360== by 0xA56DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1681360== by 0x9DCF822: ??? ==1681360== by 0x9DCF96F: ??? ==1681360== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1681360== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1681360== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1681360== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1681360== by 0x9ED5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1681360== by 0x9E6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1681360== by 0xA96FD38: PetscInitialize (pinit.c:924) ==1681360== by 0x9D9AFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1681360== by 0x9D9B01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1681360== by 0x1248E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1681360== by 0x11F993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1681360== by 0x1225FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1681360== by 0x1224F7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1681360== by 0x122B0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1681360== by 0x11E195: main (TestExtendedBidomainProblem.cpp:18) ==1681360== ==1681360== Open file descriptor 114: ==1681360== ==1681360== ==1681360== Open file descriptor 110: ==1681360== ==1681360== ==1681360== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1681360== ==1681360== ==1681360== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1681360== ==1681360== ==1681360== ==1681360== HEAP SUMMARY: ==1681360== in use at exit: 701,152 bytes in 9,383 blocks ==1681360== total heap usage: 2,375,417 allocs, 2,366,034 frees, 2,483,505,596 bytes allocated ==1681360== ==1681360== LEAK SUMMARY: ==1681360== definitely lost: 0 bytes in 0 blocks ==1681360== indirectly lost: 0 bytes in 0 blocks ==1681360== possibly lost: 0 bytes in 0 blocks ==1681360== still reachable: 24 bytes in 2 blocks ==1681360== suppressed: 701,128 bytes in 9,381 blocks ==1681360== Reachable blocks (those to which a pointer was found) are not shown. ==1681360== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1681360== ==1681360== For lists of detected and suppressed errors, rerun with: -s ==1681360== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)