==1666627== Memcheck, a memory error detector ==1666627== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1666627== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1666627== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1666627== Parent PID: 1664931 ==1666627== ==1666627== ==1666627== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1666627== Open file descriptor 12: ==1666627== at 0xEC9322D: pipe (pipe.c:29) ==1666627== by 0x18A7607D: ??? ==1666627== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1666627== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666627== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666627== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==1666627== by 0xE557FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1666627== by 0xE55801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1666627== by 0x2E291C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1666627== by 0x2D91A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1666627== by 0x2DDA06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1666627== by 0x2DD8A6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1666627== by 0x2DDF3D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1666627== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1666627== ==1666627== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1666627== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==1666627== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1666627== by 0xE58C822: ??? ==1666627== by 0xE58C96F: ??? ==1666627== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666627== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666627== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666627== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1666627== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666627== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666627== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==1666627== by 0xE557FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1666627== by 0xE55801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1666627== by 0x2E291C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1666627== by 0x2D91A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1666627== by 0x2DDA06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1666627== by 0x2DD8A6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1666627== by 0x2DDF3D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1666627== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1666627== ==1666627== Open file descriptor 114: ==1666627== ==1666627== ==1666627== Open file descriptor 110: ==1666627== ==1666627== ==1666627== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1666627== ==1666627== ==1666627== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1666627== ==1666627== ==1666627== ==1666627== HEAP SUMMARY: ==1666627== in use at exit: 700,688 bytes in 9,374 blocks ==1666627== total heap usage: 20,194,336 allocs, 20,184,962 frees, 2,578,015,641 bytes allocated ==1666627== ==1666627== LEAK SUMMARY: ==1666627== definitely lost: 0 bytes in 0 blocks ==1666627== indirectly lost: 0 bytes in 0 blocks ==1666627== possibly lost: 0 bytes in 0 blocks ==1666627== still reachable: 56 bytes in 3 blocks ==1666627== suppressed: 700,632 bytes in 9,371 blocks ==1666627== Reachable blocks (those to which a pointer was found) are not shown. ==1666627== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1666627== ==1666627== For lists of detected and suppressed errors, rerun with: -s ==1666627== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)